Pleurodeles waltl (Iberian ribbed newt): 138293652
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Entry
138293652 CDS
T10800
Symbol
KDM2A
Name
(RefSeq) lysine-specific demethylase 2A isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
138293652 (KDM2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pwl03000
]
138293652 (KDM2A)
04121 Ubiquitin system [BR:
pwl04121
]
138293652 (KDM2A)
03036 Chromosome and associated proteins [BR:
pwl03036
]
138293652 (KDM2A)
Enzymes [BR:
pwl01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
138293652 (KDM2A)
Transcription factors [BR:
pwl03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
138293652 (KDM2A)
Ubiquitin system [BR:
pwl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
138293652 (KDM2A)
Chromosome and associated proteins [BR:
pwl03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
138293652 (KDM2A)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
138293652 (KDM2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
JHD
F-box-like
F-box
JmjC
Cupin_8
PBP1_TM
PTPRCAP
Cupin_1
RPA43_OB
Motif
Other DBs
NCBI-GeneID:
138293652
NCBI-ProteinID:
XP_069089044
LinkDB
All DBs
Position
4_2:complement(1034075302..1034524190)
Genome browser
AA seq
1319 aa
AA seq
DB search
MEGEMELEEEGTRYSRRLRGTMRRKYQDDGISDEEIEGKRTFDLEEKLCSTKYNANFVIF
MEGKDFNMEYIQQGGLRAPLIFKKPDGLGIKMPHSNFSVNDVKMFVGSRRIVDVMDVNTQ
RDIEMSMSQWAKYYETPEEEREKLYNVISLEFSHTRLESLVQRPATVDLIDWVDNMWPRH
LKERQTEATNAIHGMQYPKVQKYCLMSVRGCYTDFHVDFGGTSVWYHIHRGGKIFWLIPP
TAHNLEMYESWVLSGKQGDIFLGDDVADCQRIELRQGYTFVIPSGWIHAVYTPTDTLVFG
GNFLHSFNIPMQLRIYGVEDRTRVPNKFRYPYYYEMCWYVLERYVYCMTRRSHLTKEYQK
ESLSIDLELNGSESGRKRHVKDEDQSEDEEEDEDEEEEEEDDDDDDDEDYVVEEEYKKPS
SRRCILTNPVSNGRSGIVVPKLDIGKCTRDAPLTLKRMVSTESSESASSHGSSERTIPTE
MSFAGAPKDNSPIYLTDFELEGLRSLVEKLESLPLHKKCVPTGIEDEDALIADVKKLLEE
HANDPKKLSLTGLPIVHWPKRDKYKIQLKPKVGAPIIPITKPHTMRPAARINPPYNMKPV
SSHVSGARRRRVRCRKCDACLQGECGVCHYCRDMKKFGGPGRMKQSCVERQCLAPRLPHS
VTCALCGEVDKNENGEGFEKKLMECCICNEIVHPSCLMMDGEGILNEELPNCWECPKCNE
EKKSENVMTAQPLMSPGLLEKWVTVEPQLTSMAGAVKQQRANGWQSRLKKAKHRQASALS
KMKDFRQPLLRNWTSVTEDHCIWKEESPTSPVESHLTDIQPLWMAPENDRLLLQPKRKME
DSDDETVTTKVLRPLRSREDPLASEPSSPSSRLQLTLDPGSPQSPTRGGMVTRSSPGAGP
SHHPRDDRLKRRQLLRLHTGELGIELAQEKENNPSGKELSEAERAKIRGSYLTVTLQRAP
KDFQSSSIVPKLQAITALSANLRPAPPARILSRQAQSRLQSHGDKVDNDEEEDDYDDDED
DSMDESGSNGSSPRGRRRTPGSREGQDLLMQKDVWMSVFHYLNRKELCECMRVCKTWYKW
CCDKRLWTKIDLSRWKTIVPQALSGIIKRQPVILDLSWTNISKKQLTWLVNRLPGLKDLM
LAGCSWSAISALSTSSCPLLRTLDLRWAPGIKDTQIRDLLTPPSEKPGHDNRSKLRNMID
FRLAGLDLTDATLRLIIRHMPVLSRLDVSHCSLLTDQSVNLLTAVGSSTRNSLTELNLAG
CNKMTDQCLLFLRRIPNINLIDLRGCKQITRSACESFISDLSINSLYCLSDDKLIQKIS
NT seq
3960 nt
NT seq
+upstream
nt +downstream
nt
atggagggagaaatggagctggaggaggagggcacgcgctacagccgccgactgcgcggc
acgatgcgacgcaagtatcaagacgatggcatctccgatgaagagatcgagggcaagagg
acctttgacctggaggagaaattgtgcagcaccaaatacaatgcaaattttgtcattttt
atggagggcaaagattttaatatggaatacatccagcaaggtggcctgagagcacctctt
atcttcaagaagccggatgggctcggcatcaagatgccacactccaacttcagcgtgaac
gacgtgaagatgtttgtgggtagccggcgcattgtggacgtgatggatgtaaatacacag
cgcgacatcgagatgtccatgtcgcagtgggcaaagtactatgagactcccgaggaagag
cgagagaagctgtacaatgtcatcagtctggagttcagccacaccaggcttgaaagccta
gtacagaggccagccacggtagaccttattgattgggtggacaacatgtggcctcgacac
ctaaaagagaggcaaactgaagcgaccaacgcgatccatggtatgcagtacccaaaggtc
cagaagtactgcctgatgagtgtgcgtgggtgttacactgatttccatgtagactttggt
ggcacgtcagtctggtaccacattcaccgtggtggaaagatcttctggctgatcccaccc
acggcccacaatctggagatgtacgagagctgggtgctgtcaggcaaacagggggatatt
ttcctgggtgacgatgtagcagattgccagcgcatagagctgcggcagggttatactttt
gttatcccctctggctggatccatgctgtgtacactccaacggatacactggtgtttggg
gggaacttcctgcacagcttcaacatccctatgcagcttcgaatctatggcgttgaagat
cgtacaagggtgccgaataagttccgctatccgtactactatgagatgtgctggtacgtc
ctagagcgctacgtgtactgcatgacgcgccgatctcacctcaccaaagagtaccagaag
gaatcgctcagcattgatctggaactgaatggatcggaatctggaaggaaacggcatgta
aaggatgaggaccagtctgaagacgaggaggaagatgaggatgaggaagaagaggaggag
gacgatgatgatgacgatgacgaagactatgtggttgaagaggaatacaagaagccaagt
tcccgacgctgcatcctgaccaaccctgtgtcgaacggtcgctctgggatagtggtgccg
aagcttgacataggaaagtgcactcgcgatgccccacttaccctgaagcggatggtgtcc
acagaatcatctgagtctgccagctcgcatggcagcagtgagcggaccattcccacagag
atgtcatttgctggagcccccaaggacaattctccgatttacttgacagactttgaactg
gaagggctgcgcagcctcgtcgagaagcttgagtcgttgccgttgcacaagaagtgtgtg
cccactggcattgaagatgaggatgcccttattgctgatgttaagaagctgctggaggaa
cacgccaacgaccccaagaagctttccttgaccgggctccccatcgtgcactggccgaag
agggacaagtacaagatccaactgaagccaaaagttggcgcacctattattcccatcaca
aagccacataccatgcgaccggcagctagaattaacccaccttacaacatgaagccagtg
tcgtcccacgtgtccggagctcgccgacgcagagttcgctgccggaaatgtgatgcctgc
ttgcaaggggagtgtggtgtctgccactactgcagggacatgaaaaagtttggaggccct
ggacgcatgaagcagtcttgtgtggagcggcagtgcttggccccaaggctacctcactct
gtaacctgtgccctttgcggggaagtggacaagaatgaaaatggtgagggctttgaaaag
aaactcatggaatgctgtatctgtaacgaaattgttcatccaagctgcctgatgatggat
ggagaagggatactgaacgaagagttgcccaattgctgggagtgtccaaagtgcaacgag
gagaagaaatcggagaatgtcatgacagctcagcccctgatgagtcctgggctgcttgag
aaatgggtaaccgtggagccccaactaacatccatggcaggtgccgttaagcaacaaagg
gcaaatggatggcagtccagacttaagaaggccaagcatcggcaggcaagcgctctgtcc
aagatgaaggacttcagacagccactcctgcgaaattggacaagtgttactgaggaccac
tgcatctggaaagaagaaagtcctacgagtccagtggagtcgcatcttactgacatacag
ccgctctggatggcgccagaaaatgaccggctcctattgcagccgaagcggaagatggag
gacagcgatgatgagaccgtgaccacgaaggtgctgcgaccactacggagtcgtgaggac
ccactggcctccgagccttcatctccttctagcaggctacaactaacccttgacccaggt
tctccacagtcccccacaaggggaggaatggtgactcgatcctctccgggtgctggcccc
agccatcacccccgagatgaccgtctaaagcgacggcaactcctacgtcttcacactggt
gaacttggcattgaactggcacaggaaaaagagaataatccaagtggtaaggagctgtcc
gaggcagagcgggccaagattcgtgggtcctacctcacagtgacattgcagcgggccccc
aaagattttcaatccagttccatagtgcccaagctgcaggctataactgcattgtctgca
aacttgcgcccagcgcctccagctcgcatactgtcgcgacaggcacagtccaggctgcag
tcgcatggggacaaagtggacaacgatgaagaggaggatgattatgacgacgatgaggat
gacagcatggatgaaagtggcagcaatggctccagcccccgagggcggagaaggacacca
gggtctcgagagggccaggacttgctcatgcaaaaggatgtctggatgtctgtctttcat
tacctcaaccggaaagaactgtgcgaatgcatgcgtgtctgcaagacatggtacaaatgg
tgttgtgacaagagactgtggacaaagattgatctgagccggtggaagaccatagtccca
caagctctcagcggcatcatcaaacggcaaccagtcatacttgatctcagctggacgaac
atctccaaaaagcaactaacatggcttgtcaacagactaccaggcctgaaagacctcatg
ctagcaggctgttcgtggtctgccatctctgctctcagcacttccagctgcccccttctc
aggacacttgatctgcggtgggcaccaggcattaaagatacccagatccgagacctgtta
acaccgccttctgaaaagccaggtcatgacaatcgcagcaagctcaggaacatgattgac
tttcgcctggctggccttgacctaactgatgccacactgaggctcatcatcagacacatg
cctgtcctttcaaggctggacgttagtcactgcagcctcctaaccgaccagtctgtcaac
ctgctaactgctgttggatcttcgacccgcaactcattgacagagttaaatttagcaggc
tgcaataagatgacagatcagtgcctgctgttccttagacgaatacccaatatcaacctc
atagaccttcgtggctgcaaacaaattactcgctcagcctgtgagagcttcatttcagac
ctttcaatcaacagcctgtactgcctgtcagacgacaagctcattcagaaaatcagctag
DBGET
integrated database retrieval system
