Pleurodeles waltl (Iberian ribbed newt): 138295409
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Entry
138295409 CDS
T10800
Symbol
OTOF
Name
(RefSeq) otoferlin isoform X1
KO
K19949
otoferlin
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
Membrane trafficking [BR:
pwl04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
138295409 (OTOF)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138295409
NCBI-ProteinID:
XP_069089782
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Position
5:complement(96577116..97452147)
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AA seq
2046 aa
AA seq
DB search
MALIVHLKTVTELRGKGDRIAKVAFRGLSFYTRVLESCEDEARFDETFRWPIASNIDGNE
MLEIQVFNYSKVFTNRLIGTFRMVLQKVVEEAQLEVSDTLIDDNNSAIRTSVTIEIRYQT
MDGTVGAWNDGEFLESPMHRSDIEGGYHFETDSLLSGHSQGSAVSPGRSHQSLQSAEKNF
RRVGKGVFSAMKLGKTRPPKEENKRQDEPAVLETEDLDRKAIRLGGGLDPDTISLASVTA
VTTNVSNKRSKPDIKIEPSAGRPMDYQVSITVIEARQLVGLNMDPVVCVEVGDEKKYTSM
KESTNCPYYNEYFVFEFHVPPDVMFDKIIKLSVIHSKNLLRSGTLVGSFKLDVGTVYTQQ
EHQFYHKWAILSDPDDITAGLKGYLKCDIAVVGKGDNIKTPHKANETDDDDIEGNLLLPD
GVPSERQWARFYIKLYRAEGLPRMNTSIMANVKKALIGENKDLVDPYVQVSFAGQKGKTS
VQKSSYEPMWNEQIIFTEMFPPLCKRMKIQIRDSDKVNDVAIGTHFIDLRKISNEGDKGF
LPTLGPAWVNMYGSTRNYTLMDEHQDLNDGLGEGVSFRARLLLSLAVEILDISSPDLTSS
TEVQLEQTPPIADNCTGKMEEFFLFGAFLEATMIDRRISDKPISFEVTIGNYGNQIDGTT
KPNLRKKKDGGDGDEEESELLQNSSEDEADDEGEMVSVSSTPPMKPFITDRNYFHLPYFE
KKPCIYIKSWWQDQRRRLYNANIMDKIADKLEEGLNDVHEMIKTEKPYPERRLRGVLEEL
SSGCIRFVNLANKDQNQNGRTKLDRERLKGCMRELENMGTQAKTMRSQVKKNTVRDKLKL
VHNFLQKLRFLADEPQHSIPEVFIWMMSNNKRIAYARIPSKDILYSIVDEEMGKDCGKVK
TVFLKLPGKRGFGPAGWTVQAKMEIYLWLGLNKQRKDFLSGLPCGFEENKGARGPGLQSF
PPISLAYTKKQVFQLRAHMYQARSLFAADSSGLSDPFARVFFISHSQCTEVLNETLCPTW
DQLLVFDNVELYGEAHEMRDDPPIIVIEIYDQDTVGKADFMGRTFAKPVVKMSDERYCPP
RFPPQLEYYQIYRGNSTAGDLLAAFELLQIPFDDREIRAALLAVSDPSLPKIKIGPAGKS
DLPAIDGPTDMDRGPILPVPLGIRPVLSKYRVEILFWGLRDLKRVNLAQVDRPRVDIECA
GKGVQSALIQNYKKNPNFSTLVKWFEVDLPENELLHPPLNIRVVDCRAFGRYTLVGSHAV
SSLRKFIYRPPDKKVQNWNTAAKLMNGYMALANGGPYSHPTGEIVVNVEPEVPIKKMETM
VKLEANSDAVVKVDVSEEDKEKKKKKKGEEIEEEEPDESMLDWWSKYFASIETLKEQLRQ
QEAAAAEAEEKEDMEIAEGYPFENIDHKLVDTEDCILSGSKVQAKGKEKVKAPKEDKKKK
QQAELTDKKNKQKIDELKVFNKELESEFDNFEDWLHTFNLCRGKIGDDDENVAEEDRIVG
RFKGSMCVYKVPLPDDITKEAGYDPNFGMFQGIPNNDPMNVLVRVYVVRATDLHPADING
KADPYVVIRLGKTDIKDKESYISKQLNPVFGKSFDIEATFPMESMLTVAVYDWDLVGTDD
LIGETKIDLENRYYSKHRATCGISQTYSTHGYNMWRDPVRPTQILSKLCKEGKLDGPHFG
PGGRVKVTNRVFTGPTEIEDENGQKKQTDEHLALTVLHHWEEIPRAGCKLIPEHVETRPL
LNPDKPGIEQGRLEMWVDMFPMDMPAPGPAIDISPRKPKRYDLRVIIWNTDEVILEDDDY
FTGEKSSDIFVRGWLKGQQEDKQDTDVHYHSLTGEGNFNWRFLFPFDYLMAEEKIVISKK
ESMFSWDETEYKIPARLTLQVWDADHFSADDFLGAIELDLNRFPRGAKTAKQCSIEMLTS
EVELPTVSIFKQKRVKGWWPFVARNENDELELTGKVEAELHLLTAEEAEKSPAGLGRNEP
DPLEKPNRPDTSFIWFLNPLKSIRYFIWHTYRWLILKILILILLLLMVGLFLYSMPGYLV
KKILGA
NT seq
6141 nt
NT seq
+upstream
nt +downstream
nt
atggctctaatagtgcacctcaagaccgtcaccgagctgcggggcaagggcgaccgcatc
gccaaggtggccttccgagggttgtctttctacacgcgagttcttgagagttgcgaggat
gaagccagattcgatgagactttccgatggccgatcgccagtaacattgatgggaatgag
atgctggaaatccaagtgttcaactacagcaaagtcttcaccaacaggctcattgggacc
ttccgaatggtgctgcagaaagtggtggaggaggcccagctggaggtgtcagacacgctg
atagacgacaacaactcagccattcggaccagcgtgaccattgagatcagataccagacc
atggatggcacggtgggggcctggaacgacggggagttcctggagagccccatgcaccgc
tcggacattgaagggggctaccacttcgagacagacagcctgctctccggacacagccag
ggctcggccgtctcacccggaagatctcatcaaagcctgcagtctgcagaaaagaacttc
cggagagtgggcaaaggagtattttcagccatgaaactggggaagactcgaccacctaag
gaggagaacaagaggcaagatgaacccgctgtgctggaaacggaagaccttgaccggaag
gccatacgcctgggcggtggcctggatccagacaccatctccctggcttcggtcacagcg
gttaccaccaatgtctccaacaaacggtccaagcccgatataaagatagaacccagtgcg
gggagaccaatggattaccaagtgagcatcactgtaattgaggcgcggcagctggtggga
ctgaacatggacccggttgtgtgtgttgaagttggggatgaaaagaaatacacatcaatg
aaagagtcaacaaactgcccctactacaacgagtactttgtttttgagttccacgtgcca
ccggatgtgatgtttgataagataatcaagctttcggtcatccattcgaaaaacctcttg
cgcagcgggacgctggtgggttccttcaagctggacgtgggcacagtttacacgcaacaa
gagcaccagttttaccacaagtgggccattctgtcggaccccgatgacatcacggcgggc
ctgaaaggctacttgaagtgcgacatcgctgtggtcggcaaaggagacaacattaaaacc
ccccacaaagccaacgagacggacgatgacgatatagaagggaacctgctccttccagac
ggggtgccctcggagaggcagtgggctcgcttctacatcaagctttaccgcgcagagggg
ctgccccggatgaacaccagcatcatggccaacgtgaagaaagccctcatcggggagaac
aaggacctggtcgacccctacgtgcaggtgtccttcgcgggacagaaggggaaaacctcc
gtgcagaagagcagctacgagcccatgtggaacgagcagatcatcttcacagaaatgttc
ccgccactctgcaagcgcatgaaaatccagatccgcgactccgacaaggtcaacgacgtg
gccatcggcacccacttcatcgacctgcggaaaatctccaacgagggggacaaaggtttc
ttgcctacgcttggccccgcgtgggtgaacatgtacggctcaacgcgtaactacaccttg
atggacgagcaccaggacctgaacgacggcctcggtgagggggtctcattccgagcccgg
ttactgctcagcctggcagtagagatcttggacatcagctccccagatctcaccagctca
acagaagtacaactggaacaaactccgcccatcgctgacaactgcactggcaagatggaa
gagttcttcctcttcggagccttcttggaggccaccatgattgaccgaagaatcagcgac
aaaccaatcagctttgaggtcacaataggtaattatgggaatcagattgatggcacgact
aagccaaaccttcgaaagaagaaggatggaggagatggtgacgaggaagagtctgagctt
ctgcagaactcaagcgaagatgaagctgatgatgaaggagaaatggtctcagtctcttcg
actccacccatgaaacccttcatcacagacaggaactactttcacttgccctactttgag
aagaagccatgtatatacattaaaagctggtggcaggaccaaaggagaaggctctacaat
gccaacatcatggataagattgcagacaagctggaggaaggtctgaatgatgtccatgag
atgatcaaaacggagaagccgtatcccgaacgccggctccgaggggtgctggaggagctc
agcagcgggtgcatacgctttgtgaatctggccaacaaggatcagaaccagaatgggaga
actaaactggaccgagagagactcaagggctgcatgcgggagctggagaacatggggaca
caagccaagactatgcgatctcaggtgaagaagaacaccgtcagggacaagctgaagctg
gtgcacaacttcctgcagaagttacgcttcttggcagacgagccccagcacagcatccct
gaggtcttcatctggatgatgagcaacaacaagcgcatcgcctacgcccgcatcccctcc
aaggacatcctctactccatcgtggacgaggaaatgggaaaggactgcgggaaagtcaag
acggtcttcctgaagctacccggcaagaggggctttggaccggccggctggacagtacaa
gctaagatggagatctacctctggttagggctcaacaaacagcgcaaagactttttgagc
ggactgccctgcggatttgaagaaaacaaaggtgcaaggggccctggcctacaatccttc
ccgcccatcagcctcgcctacacaaagaaacaggtcttccagctcagagcgcacatgtac
caggcgcgcagcctgttcgctgcagatagcagcggcctctcagatccctttgccagggtt
ttcttcatctctcatagtcagtgcactgaggtactcaatgagaccctgtgccccacctgg
gaccagttactggtgttcgacaatgtggagttgtacggcgaagcccatgagatgcgcgat
gaccccccgattatcgtcatagagatctacgatcaggacactgtggggaaagcagatttc
atgggccggacttttgccaaacctgtggtaaaaatgtcagatgaaaggtactgccctcct
cgcttccctccacaacttgaatattaccagatataccgaggaaactccaccgctggagat
ttgcttgcagcttttgaactcctacagattccctttgatgatcgagagataagggctgcc
ttacttgctgtatctgaccccagtttgcctaaaatcaagattgggccagcagggaaatct
gacctgcctgcgattgacgggcccacagatatggacaggggtcctatactgccagtccct
cttggcataaggcctgtgctgagtaaatacagagttgagattttgttctggggtctgaga
gacctgaagagagttaacctggctcaggtagacaggcccagggtggacattgagtgcgct
ggcaaaggggtgcagtctgccctgatccagaactacaagaagaaccccaacttcagcacc
ctggtcaagtggtttgaagtggacttgccggagaatgagctgcttcatccacctttgaac
attcgagtggtggattgccgggcctttggcagatatactcttgtgggttcacatgccgtc
agctcactgaggaagttcatctatcggcctccggataagaaagtgcaaaactggaacact
gcagctaaactgatgaacggctatatggcactggcaaacggaggcccctactctcatccc
acaggtgaaattgttgtcaatgtggaacccgaggtgcccatcaagaaaatggaaaccatg
gtgaagctggaggcaaactcagatgccgttgtgaaagttgacgtgagtgaagaggataag
gagaaaaagaagaagaagaaaggcgaggagatagaagaagaggagccggatgaaagcatg
ctggactggtggtctaaatattttgcttccattgagactctgaaagagcaactgcgacaa
caggaagctgcggcggcagaggcagaggagaaggaagacatggagatcgcagagggttat
ccttttgaaaatattgaccataaacttgtagatacggaagactgtattctttctggctca
aaagtgcaggcgaagggcaaggagaaagtcaaggcacccaaggaggacaagaagaagaag
cagcaggcggagctgaccgacaaaaagaacaaacaaaaaattgatgagttgaaggtattt
aacaaagagctggaatcagagtttgacaacttcgaggactggctgcacaccttcaacctc
tgccgagggaagatcggtgatgacgatgaaaatgtggctgaggaagatcggatagtagga
aggtttaaaggttccatgtgtgtgtacaaagtccctcttccagatgacattacaaaagaa
gctggatatgaccccaactttgggatgtttcaaggaattccaaataatgacccaatgaac
gtactggtgagggtgtacgttgtaagggccacagacctgcaccctgccgatatcaatggc
aaagcggacccctacgtcgtcatcaggttggggaaaactgacatcaaagacaaggaaagt
tacatctccaagcagctgaaccccgtctttggaaagtcctttgacattgaagccacattc
cccatggagtccatgctgactgttgctgtgtatgactgggacttggtgggtacagatgac
ctgattggggaaacaaagattgaccttgaaaatcggtactacagcaaacacagggccacc
tgtggaatctcacagacctactctactcacggttacaacatgtggagggaccctgtgagg
cccactcagattctttccaagctctgcaaagaaggaaagttggatggacctcactttgga
ccaggagggagagtgaaggtcacaaacagagttttcactggcccgacagaaattgaagac
gaaaacggtcagaaaaagcagacagacgaacatttggccctgacagtgcttcaccactgg
gaggagatcccacgagcgggctgtaagctgattcctgagcacgtggagacgcgacccctg
ctgaaccctgacaagccaggcattgagcagggccgtctggaaatgtgggtggacatgttt
ccaatggatatgccagctccaggcccggccatcgacatctcccccaggaagccaaagaga
tacgatcttagagtgataatatggaatacagatgaggtaatccttgaagacgatgattac
ttcacaggagaaaagtctagtgacatttttgtcagggggtggctgaagggccagcaggag
gacaagcaggacacagacgtccattaccactccctcaccggtgaaggaaacttcaactgg
aggttcctatttccgtttgactatctaatggccgaggaaaagattgtcatctccaagaag
gagtccatgttctcctgggatgagactgaatacaaaatcccagcacgcctcaccctacaa
gtctgggacgctgaccacttctctgcagatgacttccttggtgctattgaactggactta
aaccggttccctcgtggggcgaaaacggcgaaacagtgcagcattgagatgctaacaagt
gaagtggaactgccaacggtctccatcttcaagcagaagagggtgaagggctggtggcct
tttgtggccaggaatgagaatgatgaacttgagctcacgggtaaagtggaggccgaactc
cacctgctcaccgcagaagaagcggagaaaagtcctgcagggctcgggaggaacgaacca
gatccgttggagaagccaaatcggccagataccagcttcatttggtttctcaacccactg
aagtccatccgctacttcatctggcacacttaccgctggctgatcctgaaaatactcatc
ctcatcctcctcctgcttatggtcggcctcttcctttactctatgccgggctacctggtt
aagaagatcctgggtgcctga
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