Pleurodeles waltl (Iberian ribbed newt): 138296786
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Entry
138296786 CDS
T10800
Symbol
BABAM2
Name
(RefSeq) BRISC and BRCA1-A complex member 2 isoform X1
KO
K12173
BRCA1-A complex subunit BRE
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03440
Homologous recombination
Brite
Ubiquitin system [BR:
pwl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
138296786 (BABAM2)
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
BRISC complex
138296786 (BABAM2)
Chromosome and associated proteins [BR:
pwl03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
138296786 (BABAM2)
DNA repair and recombination proteins [BR:
pwl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
138296786 (BABAM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138296786
NCBI-ProteinID:
XP_069092319
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Position
5:complement(1775147512..1775943488)
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AA seq
399 aa
AA seq
DB search
MSPEATLNRMSPALSPFISTVVRNGKVGLDSTNCLRITDLKSGCTSLTPGPNCDRFKLHI
PYAGETLKWDIIFNALYPELPPDFIFGEDAEFLPDPSALHNLSSWNPQDPECLLLVVKEL
VQQYHEYQCSRLRESSRLMFEYQTLVEEPQYGENMEVYAGKKNNWTGEFSARFLLKLPVD
FSNIPTYLLKDANEDPGEDVALLSVSFEDTEASQVFPKLYLSPRIEHALGGATALHIPTI
PSGGCLIDYVPQVCQLLTNKVQYIIQGYHKRREYIAAFLSHFGTGMVEYDAEGFTKLTLL
LMWKDFCFLVHIDLPLYFPRDQPTLTFQSVYHFTSSGQLYSQTQKNYPYSPRWDGNEMAK
RANVEKRERKFFQGRISKPLSPSSKRRPLLMESSSLVGS
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgtctcccgaagccaccttgaatcggatgtctccagctctctcaccgttcatttccact
gtggtcagaaatggcaaagtaggactggactcaacaaactgtttacgaattacagacctc
aaatctggttgcacgtcattgacacctggaccaaattgtgaccgttttaagctacatatc
ccgtatgccggagaaacactgaaatgggatattattttcaatgccctgtacccagagctg
ccaccagattttatttttggagaggatgccgagttcttgccagatccctcagcccttcat
aatctgtcatcctggaatccccaggaccccgaatgcctcttgctggttgtgaaagagcta
gttcaacagtaccatgagtaccagtgcagccggctgcgtgagagctcccgtctcatgttt
gagtaccagactctagtcgaagaacctcagtatggagagaacatggaggtctacgcgggc
aaaaagaataactggactggcgagttctcggcgcggttccttttgaagttgccagtggat
ttcagcaatatccccacatacctcctcaaggatgcaaatgaagaccctggggaagatgtg
gctctcctttctgttagttttgaagacacagaagcttctcaggtgttcccaaaactgtac
ctctccccccgcatcgagcacgccctgggaggtgcaactgctctgcatattcccaccatt
cccagcgggggatgcctcatcgactacgtcccccaagtgtgccaactgctaaccaacaag
gtgcaatacataatccagggataccacaagagaagagagtacattgcagccttcctgagt
cactttggaacggggatggtggaatacgacgccgagggcttcacaaagctcaccctgctg
ctgatgtggaaggacttctgcttccttgttcacattgatctacccctgtattttccacgg
gaccagcccacgctcacctttcagtcggtgtaccacttcaccagtagtgggcagctgtat
tcccagacccagaagaactatccctacagcccacgctgggatggcaacgaaatggccaag
agagcaaacgtggaaaaaagagaaagaaaattctttcaagggcgcatttcaaaacctttg
tcccccagttccaagaggcggcctttgctaatggaaagctctagtctggtgggatcatga
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