Pleurodeles waltl (Iberian ribbed newt): 138299127
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Entry
138299127 CDS
T10800
Name
(RefSeq) tumor necrosis factor-like
KO
K03156
tumor necrosis factor superfamily, member 2
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04010
MAPK signaling pathway
pwl04060
Cytokine-cytokine receptor interaction
pwl04150
mTOR signaling pathway
pwl04210
Apoptosis
pwl04217
Necroptosis
pwl04350
TGF-beta signaling pathway
pwl04620
Toll-like receptor signaling pathway
pwl04621
NOD-like receptor signaling pathway
pwl04622
RIG-I-like receptor signaling pathway
pwl04625
C-type lectin receptor signaling pathway
pwl04920
Adipocytokine signaling pathway
pwl05132
Salmonella infection
pwl05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
138299127
04350 TGF-beta signaling pathway
138299127
04150 mTOR signaling pathway
138299127
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
138299127
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
138299127
04217 Necroptosis
138299127
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
138299127
04621 NOD-like receptor signaling pathway
138299127
04622 RIG-I-like receptor signaling pathway
138299127
04625 C-type lectin receptor signaling pathway
138299127
09152 Endocrine system
04920 Adipocytokine signaling pathway
138299127
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
138299127
09171 Infectious disease: bacterial
05132 Salmonella infection
138299127
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pwl04052
]
138299127
00536 Glycosaminoglycan binding proteins [BR:
pwl00536
]
138299127
Cytokines and neuropeptides [BR:
pwl04052
]
Cytokines
Tumor necrosis fators
138299127
Glycosaminoglycan binding proteins [BR:
pwl00536
]
Heparan sulfate / Heparin
Cytokines
138299127
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Motif
Other DBs
NCBI-GeneID:
138299127
NCBI-ProteinID:
XP_069093273
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Position
6:complement(39215314..39220676)
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AA seq
237 aa
AA seq
DB search
MSTESFLIEMEKGQVVVVRDEAQRRRDRCWRWLAGVSFAALAGATLILALLFFNVIPSPH
SSSKHEDPTHAAPVPEQYISHIPQQLKLQAMESQKPAAHLIADFNNKKLEWISDKGYAFL
ENGMKLEDNHLVIPSRGLYFVYTQVVYYGGKCPPRGSLYLSHSVHKRSEAYPIQMPLLSA
IKSACEGTTHNGNPWYETIYQGGVFSLEEGDVLSTETSQPSHLDPKGAQNYFGAIAM
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgagagcttcctcatcgagatggagaagggccaggtggtggtggtccgggac
gaagcccagcggcgacgagaccggtgctggcggtggctggctggcgtgtccttcgcagcg
ctagctggagccaccttgatcttggcgctgcttttcttcaatgtaattccctcgccgcac
agctcctcgaagcatgaggacccgacacacgctgccccagtccccgagcagtatataagt
cacatcccccagcagctcaagttacaggccatggagtcgcagaagcctgcagctcacctc
atagctgacttcaacaacaagaagctggagtggatctcagacaagggctacgccttcctg
gagaatgggatgaagctggaagacaaccacctggtcatcccctcccgcggcctctacttt
gtctacactcaagttgtctactatgggggcaaatgtccaccccgtggcagcctctacctg
tcgcactctgtccacaagcgctcggaggcctaccccatccaaatgcctctgctgagtgcc
atcaagtcagcctgcgagggcaccacccacaatggaaacccctggtacgagaccatctac
cagggaggggtcttcagcctggaggagggtgatgtgctctccacagaaacctcccagcca
tcccacctggaccctaagggggcacagaactactttggggccattgcaatgtaa
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