Pleurodeles waltl (Iberian ribbed newt): 138299491
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Entry
138299491 CDS
T10800
Symbol
BRCA1
Name
(RefSeq) breast cancer type 1 susceptibility protein isoform X1
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03440
Homologous recombination
pwl03460
Fanconi anemia pathway
pwl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
138299491 (BRCA1)
09124 Replication and repair
03440 Homologous recombination
138299491 (BRCA1)
03460 Fanconi anemia pathway
138299491 (BRCA1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pwl01009
]
138299491 (BRCA1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pwl04121
]
138299491 (BRCA1)
03036 Chromosome and associated proteins [BR:
pwl03036
]
138299491 (BRCA1)
03400 DNA repair and recombination proteins [BR:
pwl03400
]
138299491 (BRCA1)
Enzymes [BR:
pwl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138299491 (BRCA1)
Protein phosphatases and associated proteins [BR:
pwl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
138299491 (BRCA1)
Ubiquitin system [BR:
pwl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
138299491 (BRCA1)
Multi subunit type E3
BRCC complex
138299491 (BRCA1)
Chromosome and associated proteins [BR:
pwl03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
138299491 (BRCA1)
DNA repair and recombination proteins [BR:
pwl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
138299491 (BRCA1)
BRCA1-A complex
138299491 (BRCA1)
BRCA1-B complex
138299491 (BRCA1)
BRCA1-C complex
138299491 (BRCA1)
BRCA complex
138299491 (BRCA1)
FA (Fanconi anemia) pathway
Downstream FA components
138299491 (BRCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_assoc
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_4
BRCT_2
zf-RING_2
zf-RING_5
zf-C3HC4_3
zf-Nse
RING_XB3-XBAT31
BRCT_3
zf-RING_6
zf-RING_10
zf-ANAPC11
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
138299491
NCBI-ProteinID:
XP_069093862
LinkDB
All DBs
Position
6:complement(179770274..180247377)
Genome browser
AA seq
1957 aa
AA seq
DB search
MSFSAVNMEEVHDVLSIMEKNLECPICLDLMSEPVTTKCDHIFCRFCMLKLLNKKRKGCA
QCPMCKHEVTKRSLQESPRFKLLVEGLMRTIRAFELDTGYKFSPSPDRSNKAIKACPIET
PEKDMGVLVHSTGYRSRRKRVYSDGQENSDVTQQEINSKVNLKMDVFQESPLRRSKRQKL
SSEKHVQMKFGSQSSEEDLLEKAGSLGVQEGESIPAPDEESDPEVDECNERESESAESRL
STRPDASEMIQSDLAEFNFSEKEDESVKGVLSHAVDVRTTGSSLSEPDRPTSCGATVFDL
PEQKCDGTTNDAVQHDGKLLSLDTKSVKTELLPVDIKNQSPKRYSTSRKSSGGDLLDEDR
ETSKHDSSYEKEESLLHPDVSECSVSCSISRKRAKAGVQRVTEWLSKLDDEMVTLPPPDD
TALDLQKLPSVTHSEKGDSDGHSWVSDKTEIMEEPLECALLYEQGQSASKPQLPTIEDQV
FGKTYKRERKSNTHLNLSVFSERKSTDEVVVDLVNECKASKTRTLKRRKKIVDLQPEDFI
RKNNKDQNKSTCGDMLESAGDRISRRKLSMRGEVNFEVSPEHLLQKAGENGCKSPIENSL
HGIVDRTAKKKTNQSAADFQCCPPEGQEGGGEIIEDISKGDMKPVFKTLTEQVHGDRKMM
SPPSNTDSQHNATLISVVGSKHCKSRTPSAPVLNQFCKAELGKHKHAEKGVAVSVPSPQN
QIELQIDSYPSSEEQRKAGGGARNLRRSRRLLLQTEGINVQVVPCSGPNISREEDHFSVS
GDMVPGECLTGPTSICPVSGDHEDAVICNELRSDISHKENELYNANKTLQCAPENSSVLS
DKDLHTTVSEESVEWSSSGLHNESEEAATQNSTSMLMASTVIGQRNPKLNSSCLNKEHSK
DKIGTECSSDTKSMYVLKNPKNELDSTKRHSPNINDNFVSAINLEAEDSELDTEYLLKTF
KGAKRRSFLLQPSPPVECASRSQVLISAKETSCNHKDTPKRNSNYGNKVQNTHLEHKILS
KGNVSLCVSAEPLSTAGHSICSNTNYSNMEEKVHFVAQNQELCTTPMKKKVTNRNTKRLQ
KSRPRSVGNCSLLDVVESSYHSIFKDSGRSGDLQNKELLVQGTESNTINETELSEETNQV
VKTIVCKDSGLVLNSKAELMQPPLELTHQSPITVCGSISSSETRQGEGVQLRSNCVDSAL
NKEQINQTSHPSVSQENMVEIFPKQTVAISCSALNNTPILSTTPDGLLCTPNEMRGNSAI
YGLSINSKSTPLAKFVESSVEGSSGSSVLVFKRSAQRHPAMKLFSSDSSEEDNMPSFQGL
LFSDAFNPSMDSAGPKNSTGESSAKQQGGGLLLSSNSTSEQQEQKIQGDTFGEQSPTPSQ
QSECSVNLFSSQSNASEKSDKEGDDPKTLMVALNSRCVLGTEKATPELEFVTEDHKEAEL
DSRNRNHNIQNTDQHLAELSEYESEASHTGDSSGLSSQGEILTTQQREAMQNNLEKLQEE
MAALQAVLEQNETQNLEPQRAASARPEQSAAASSNETTKSPDKAPSLASEPNAQARDDDV
FIGDADDEPDAIPSYPSAGERADQDYRRSPTPPPTPTRSQLSKRKTPEKVRVSMRILKEL
KTISAQDDSQSVNADQPEPHEKAEQPICEGSESGEKGTAPRRSSARVLSKLYEHIGMTPN
KQSTFVHPPSRNSHGSFKDSLVSPCISSKDQRRNPKRSGLETTSTFVSPHRGRAEPVTVK
TPVVTTKRKISMVASGLNQSELILVQKFASKTQSTLCHQITESTTHVIMKTDADLVCERT
LKYFLGIAGRKWVVGYQWIVQCFKEGRILDELDFEVRGDVINGRNHRGPQRARLAADGML
WKDFEICCFGSFTDMTTEHLEWMVKLCGGLVVKQPHLFGHSRSAAVVVVQPDACPKETDF
SAFKKKYNVTVVTREWMLDSVACYECQQFDAYLLSDT
NT seq
5874 nt
NT seq
+upstream
nt +downstream
nt
atgtcattttctgcagtgaacatggaagaggtgcatgatgtgctttcaatcatggagaag
aacttggaatgcccaatctgcctggacctcatgtcggagcccgtgacaaccaagtgcgac
cacatcttctgcaggttctgcatgttgaagcttctcaacaaaaagaggaaaggctgcgcg
caatgcccgatgtgcaagcacgaagttaccaagaggagccttcaggaaagtcctcgattt
aagctgctggtagaagggctgatgagaaccatccgtgcctttgagctcgacaccggatac
aagttttctcccagtccggacaggagcaacaaggcgatcaaggcgtgtcccattgaaaca
ccggagaaagatatgggagttcttgtccacagcacaggctacaggagcaggagaaagaga
gtctacagcgatggacaggaaaacagtgacgtcacgcagcaggaaatcaactcaaaagtg
aatctcaaaatggacgtgtttcaagaaagtcccctgaggaggagcaaaagacagaaactt
tcatccgagaaacatgtgcaaatgaaatttggatcacagtcttcggaagaagatttattg
gaaaaggcaggcagccttggtgtccaggaaggggaatccatcccggctccagatgaagaa
tctgatcctgaggtggacgagtgcaatgagagggaaagcgaatctgctgagagtagattg
tctacgaggccagatgcatcggaaatgatccagtctgatctagctgaattcaacttttca
gagaaggaagacgaaagtgtaaagggtgtcttatctcatgctgtggatgtcagaaccaca
ggttcatctctgtcagaaccagatcgaccgacatcctgtggtgctactgtgtttgacctt
ccagaacagaaatgtgatggaacaactaatgatgctgtacagcacgatgggaaacttttg
agccttgatacaaaatctgtgaagacagagcttctgccagtggacataaagaaccaaagc
cccaaaaggtactctactagtagaaaaagtagtggtggtgatctgcttgatgaggacaga
gaaacttccaaacatgacagctcctatgaaaaggaagagtcactgcttcatccggacgtt
tcggagtgctccgtgtcttgttcaatctccagaaaaagagccaaagctggtgtgcagaga
gttacggagtggctttccaaacttgatgacgaaatggtcacccttcctcccccggatgac
actgcgcttgatcttcagaagttgccttcagtaacacatagcgagaaaggtgactcggat
gggcactcttgggtttcagacaagaccgaaataatggaagagcctttggaatgtgctcta
ctttacgagcagggccagtctgcatcaaagccacagttgccaactattgaagaccaggtg
tttgggaaaacatacaagcgagaacgtaaatccaatacccatcttaacctgagcgttttc
agtgaaagaaaaagtacggatgaagttgtagtggatcttgttaacgaatgcaaggcctca
aaaacacgtactttaaagcgaagaaagaaaattgttgatctgcaacctgaagacttcatc
cggaaaaacaacaaagatcagaataaatctacttgtggagacatgcttgagagtgctggt
gatagaatttcaagaagaaaactgagcatgagaggagaagttaactttgaggttagccca
gagcaccttctgcaaaaagcaggtgaaaatgggtgtaaatctcctattgaaaatagtctt
catggcattgttgatagaactgcaaaaaagaagactaaccagtcagctgctgattttcag
tgttgccctcctgaaggtcaagaggggggtggtgagataatagaggacatatctaaggga
gatatgaaaccagttttcaagactttgacagagcaagtgcatggtgacagaaaaatgatg
tcaccaccgtccaacactgacagccagcacaatgcaactttaataagtgttgtagggagc
aagcactgcaaatctcggacaccgagtgctccagtcctcaaccagttttgcaaagctgag
cttggaaaacataaacatgcagagaagggtgtagctgtttcagtgcctagtccacaaaat
cagattgagctgcagattgatagttacccaagtagtgaagaacaaagaaaggctggaggt
ggtgcaaggaacctccggcgaagccgaagacttctcttgcaaaccgaaggaatcaatgtt
caagttgtaccatgtagtggcccaaacatctcaagagaggaagatcactttagtgtaagt
ggagatatggtcccaggagagtgcctgactggccctacttccatctgccctgtttcgggt
gaccatgaagacgcagtaatctgcaatgaactgagatcagacatcagccacaaagaaaat
gaactttacaacgcaaataaaacactacagtgtgctcctgaaaattcttctgttttgagt
gataaggacttgcataccacagtgtcagaggagagcgtagagtggtcttctagtgggctc
cataatgagtctgaagaggctgctactcaaaacagcacgtctatgcttatggcttctact
gttattggccaaaggaatcctaaattaaacagttcatgtttgaataaagagcattctaaa
gacaagatcggaacggagtgttcctcagatacaaaatccatgtatgttttgaaaaatccg
aaaaatgagttggattctacaaagaggcactctccaaatataaatgataattttgtatcc
gctataaatttagaagctgaggacagtgaacttgatacagaatacctgctaaaaaccttt
aaaggtgccaagcgaaggtcctttttactgcaacctagtccaccagtggagtgtgcttcc
agaagtcaggtgttgataagtgcaaaagaaacgagctgcaatcacaaggataccccaaaa
agaaactcaaactatggtaacaaagtgcaaaatacgcacttggaacacaagatcttatct
aaaggaaatgtttcactctgtgtatctgcggaaccccttagtactgcagggcacagtata
tgcagtaacacaaactacagtaacatggaggagaaggtccattttgttgcacaaaatcaa
gagctttgcacaacaccgatgaagaagaaagttacaaataggaacacaaaacggctacag
aagtccaggcctcgcagtgtgggaaattgttcacttttagatgttgtggagagttcctac
catagtattttcaaagacagtggtaggtcaggtgatttgcagaacaaagaactcctagtt
cagggcacagagtcaaacacaattaatgaaaccgagctcagcgaggaaaccaaccaagtg
gtaaagaccatagtatgtaaagacagtggccttgtattaaactccaaggcggaattaatg
cagcctccccttgaacttacacatcaaagccccatcacagtctgcggcagcatttcttcc
agtgaaactagacaaggggaaggagtacaactgaggagcaattgtgtagatagtgctctg
aataaggaacaaattaatcaaacttcgcatccaagcgtatctcaagaaaacatggtagag
atcttccctaaacaaacagttgcaatttcctgtagtgctctgaacaacactccaattttg
tctacaacccctgatggtttattgtgcactccgaatgagatgagggggaattcagccata
tatggtcttagcataaatagtaaatccactccgttggccaagttcgtagagagcagcgtt
gaggggagcagtggatcttctgtactagtatttaagagatctgctcaaaggcacccagca
atgaaattgttctcttctgattctagtgaagaagataacatgccaagcttccagggtttg
ctgtttagtgatgctttcaacccatctatggactctgctggcccaaaaaactcaacaggt
gaatcttcagcaaagcaacaagggggagggcttctgttgagcagcaacagtacaagcgag
caacaggagcagaaaattcagggggacacttttggagaacagtctcctactcccagccag
cagtctgagtgctctgtaaatttgttttcttcccagtccaatgcctctgagaagtcagat
aaggaaggagatgaccctaagactttgatggtggctttaaactccaggtgtgtgctggga
actgagaaggctactccagaactagagtttgttactgaagaccataaagaagcagaattg
gacagtaggaacagaaatcacaatatccagaacacagatcaacatttagctgaactttct
gaatacgaaagcgaagccagccacaccggtgattcctctgggctttcatctcaaggcgag
attcttactacgcagcagagagaagccatgcagaataatttggaaaaacttcaggaagaa
atggccgcccttcaggctgtgttggagcagaacgaaactcaaaatttggaaccgcagaga
gccgcgagtgctcgacccgagcagagtgcagctgcctcgtccaacgagactacgaaatct
ccggataaagcaccatcacttgcgtcagagccgaatgcgcaggcgcgcgacgacgacgtt
ttcatcggagacgcagacgacgagccagacgctattccaagttatccttctgctggggaa
agggcggatcaggactacagaagatccccaacgccaccacctactcctactagatcccag
ctctcaaaaaggaagactccagaaaaggtcagggtttctatgcgtatcctgaaagagctc
aaaaccatctctgcccaagatgattctcagtcagtaaacgctgaccagcctgagccacat
gagaaagctgaacagcctatctgtgaaggatcagaatctggtgaaaagggaactgcacct
aggcgaagcagtgcaagagttctctctaagctgtatgaacatattggcatgacccccaac
aagcagtctactttcgtacacccaccttcaaggaattcacatggtagtttcaaagattca
ctggttagcccttgcattagttccaaagatcaacggagaaaccccaagaggagtggactt
gaaacaacatctacctttgtgtctcctcaccggggcagggccgagcctgtaacggtaaag
actccggtggtgacgaccaagagaaagatatctatggtggcatcaggactcaaccagagt
gagctgattctggtacagaaatttgccagcaaaacccagagcactttatgtcatcagatt
actgaaagcacgacccatgttataatgaaaacagatgcagacttggtttgcgagaggacc
ctcaagtacttcctggggatagctggcagaaaatgggtggtcggttatcagtggattgtg
cagtgtttcaaggaaggaagaattcttgatgagctcgactttgaagtgagaggagatgtg
atcaatggcagaaaccaccgaggtccccagagagcgcggctggctgctgacggcatgctc
tggaaagactttgagatttgctgctttggttcattcacggatatgaccacagagcatctg
gagtggatggtgaaactttgtggaggattagttgtgaagcaacctcatctgtttgggcac
agtcggtctgctgccgtagtggttgtgcaaccagatgcctgcccaaaagaaactgacttt
agtgcctttaagaaaaagtacaatgtcacggtggtgacccgggagtggatgctggacagc
gtcgcgtgctacgagtgccaacaattcgatgcttaccttttgtcggatacttga
DBGET
integrated database retrieval system
