KEGG   Pleurodeles waltl (Iberian ribbed newt): 138300259
Entry
138300259         CDS       T10800                                 
Symbol
SMNDC1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
pwl  Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pwl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    138300259 (SMNDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pwl03041]
    138300259 (SMNDC1)
Spliceosome [BR:pwl03041]
 Complex A
  U2 snRNP components
   U2 related factors
    138300259 (SMNDC1)
 Complex B
    138300259 (SMNDC1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    138300259 (SMNDC1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR DOR RimM
Other DBs
NCBI-GeneID: 138300259
NCBI-ProteinID: XP_069095511
LinkDB
Position
6:786287702..786349968
AA seq 257 aa
MAEELAKQLASYKAQLQQVEAALSANGENDDLLKLKKDLQEVIELTKDLLSTQPSENLTS
SDHSTTDLPANFWQVGDRCMSVWSEDGQWYEAEIEEIDEENGTAAITFSGYGNAEVIPLL
NLKPVEEGRKAKEESGNKPMSKKEMIAQQREYKKKKALKKAQRMKELEQEREVQKSKWQQ
FNNKAYSKNKKGQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKYNICRSLNDRC
QGKSRDLEALQSSLTSC
NT seq 774 nt   +upstreamnt  +downstreamnt
atggcggaagaacttgccaagcagttagccagctacaaagcgcagcttcagcaggtggag
gctgcattgtctgcaaatggagagaacgatgacctattaaagctgaagaaagatttgcag
gaagttatagaattaaccaaagacctcctttccacacaaccgtctgaaaatcttacaagc
tcagaccattctaccaccgatctgcctgctaatttttggcaagttggcgatcgatgcatg
tcagtctggagcgaagatggacagtggtatgaagcagagatcgaagagattgatgaagag
aacgggacagcagctatcaccttcagtggttatggcaatgcagaggtcataccgcttctt
aacctcaagcctgttgaagagggaaggaaggcaaaggaggaaagtggaaataaacccatg
tcgaaaaaagaaatgatcgcacagcaacgagaatataaaaagaagaaagcattgaaaaaa
gcccagagaatgaaagaacttgaacaggagcgtgaagttcagaaatcaaaatggcaacaa
ttcaacaataaagcctattcaaagaacaaaaaaggccaggttaaaagaagtatatttgcc
tcccctgagagtgtaactggcaaggttggagttggcacatgtggcattgcagacaaacca
atgacacagtatcaagacacttctaaatataatatttgcagatctctgaatgacagatgc
cagggcaagtcaagggacctagaagctttgcagtcatcgttgacatcatgctga

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