Pleurodeles waltl (Iberian ribbed newt): 138300919
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Entry
138300919 CDS
T10800
Symbol
CXCL12
Name
(RefSeq) stromal cell-derived factor 1
KO
K10031
C-X-C motif chemokine 12
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04060
Cytokine-cytokine receptor interaction
pwl04672
Intestinal immune network for IgA production
pwl04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
138300919 (CXCL12)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
138300919 (CXCL12)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
138300919 (CXCL12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pwl04052
]
138300919 (CXCL12)
00536 Glycosaminoglycan binding proteins [BR:
pwl00536
]
138300919 (CXCL12)
Cytokines and neuropeptides [BR:
pwl04052
]
Cytokines
Chemokines
138300919 (CXCL12)
Glycosaminoglycan binding proteins [BR:
pwl00536
]
Heparan sulfate / Heparin
Chemokines
138300919 (CXCL12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IL8
Motif
Other DBs
NCBI-GeneID:
138300919
NCBI-ProteinID:
XP_069096911
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All DBs
Position
6:complement(1431831246..1431930812)
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AA seq
93 aa
AA seq
DB search
MDARALALLSLLLAAVCLSEAKPVSLSYRCPCRSFESFVSRNNIKHLKILSTANCSLQIV
AKLKNSSRQVCLDPKIKWIQEYLEKFLNKKAKM
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgcgagccttggccctgctgagcctgctgctggccgctgtctgcctctcagaa
gcgaagccagtcagcctgagttatcgatgtccctgccggtcctttgagagctttgtgtca
aggaacaacatcaagcacctgaagatcctgtccacggccaattgctccctccaaattgtt
gcaaagctgaagaacagtagcagacaggtgtgcctggaccccaagatcaagtggattcaa
gaatacctggagaaattcctaaacaagaaggcgaagatgtag
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