Pleurodeles waltl (Iberian ribbed newt): 138301424
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Entry
138301424 CDS
T10800
Name
(RefSeq) H-2 class II histocompatibility antigen, E-S beta chain
KO
K06752
MHC class II antigen
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04145
Phagosome
pwl04514
Cell adhesion molecules
pwl04672
Intestinal immune network for IgA production
pwl05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
138301424
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
138301424
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
138301424
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
138301424
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pwl04147
]
138301424
Exosome [BR:
pwl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
138301424
Exosomal proteins of epithelial cells
138301424
Exosomal proteins of breast milk
138301424
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_II_beta
C1-set
Ig_3
MHC_I
Ig_2
Motif
Other DBs
NCBI-GeneID:
138301424
NCBI-ProteinID:
XP_069098006
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Position
6:complement(1710532430..1710595135)
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AA seq
267 aa
AA seq
DB search
MGGAWRTTGGLMALLALLGARAIHGRETAVDFVAEVRSECRFLNGTQQVRYLRRFAYNGQ
QFVHFDSDLGYFVADTEFGEPDAKYWNSDEEFIQRLKAEVERFCRHNYDVFESSMPQRRL
KPSVRLYASKTVDPKKPHRLTCNVNGFYPYGITVRWFKNGLEDPGVVSSELLQNGDWTAQ
IMVLLSTTIQHGDIFICEVEHISLEQPIRLEWKLQASESARNKMVTGIVGFVLGGIFITI
GLVFYLKNKKGTRQFIDCAPEEANFMN
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atggggggcgcctggaggaccacgggggggctcatggccctgctggccctgctgggagct
cgggccatccacggcagagagaccgcagtggacttcgtggcggaggtgaggagtgagtgc
cgcttcctgaacgggacccagcaggtccggtacctgcggcgcttcgcctacaacgggcag
cagttcgtgcacttcgacagcgacctggggtacttcgtggcggacacggagttcggggag
ccggacgccaagtactggaacagcgacgaggagttcatacagcggctgaaggccgaggtg
gagcgcttctgcagacacaactacgacgtgttcgagagctccatgccgcagaggagactg
aagccctcagtgagattgtacgcatcgaagactgtggacccgaagaagccacaccgcctc
acatgcaatgtgaatggtttctatccttacggcatcacagtccgctggttcaagaatggc
ctggaagacccaggcgtggtgtcctcagagctgctccagaatggagactggactgcccag
atcatggtactattgagtaccaccatccagcatggagacatcttcatctgcgaggtggaa
cacatcagcctggagcagccgatccgccttgagtggaagcttcaagcctccgagtcggcc
agaaacaagatggtgacaggaatcgtgggcttcgtgctcggagggatcttcatcaccatt
ggacttgtgttctacctgaagaacaaaaaaggaacacgtcagttcatcgattgtgcgcct
gaagaagccaatttcatgaattag
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