Candidatus Wolfebacteria bacterium GW2011_GWB1_47_1: UX70_C0001G0191
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Entry
UX70_C0001G0191 CDS
T04023
Symbol
ligA
Name
(GenBank) ligase protein
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
pwo
Candidatus Wolfebacteria bacterium GW2011_GWB1_47_1
Pathway
pwo03030
DNA replication
pwo03410
Base excision repair
pwo03420
Nucleotide excision repair
pwo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pwo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
UX70_C0001G0191 (ligA)
03410 Base excision repair
UX70_C0001G0191 (ligA)
03420 Nucleotide excision repair
UX70_C0001G0191 (ligA)
03430 Mismatch repair
UX70_C0001G0191 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pwo03032
]
UX70_C0001G0191 (ligA)
03400 DNA repair and recombination proteins [BR:
pwo03400
]
UX70_C0001G0191 (ligA)
Enzymes [BR:
pwo01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
UX70_C0001G0191 (ligA)
DNA replication proteins [BR:
pwo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
UX70_C0001G0191 (ligA)
DNA repair and recombination proteins [BR:
pwo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
UX70_C0001G0191 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
UX70_C0001G0191 (ligA)
MMR (mismatch excision repair)
DNA ligase
UX70_C0001G0191 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
UX70_C0001G0191 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
BRCT
HHH_2
HHH_5
PTCB-BRCT
BRCT_2
DNA_ligase_ZBD
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
AKM77920
UniProt:
A0A0G4ARK2
LinkDB
All DBs
Position
170542..172644
Genome browser
AA seq
700 aa
AA seq
DB search
MKKDEASNRIIQLRKTINHHRYLYHVLDEQEISDAALDSLKKELFDLEQQYPEFITPDSP
TQRVGGTPLKAFKKVAHEAQMLSFNDAFSQEDMRDWMKRNENYLSQPPSPQISNSLLPTS
NLFYGELKIDGFAIELLYEDGTLKQASTRGDGIIGEDVTQNIRTVEAIPLELISANKARA
NAKKLGLAIDKFDFTAKHLVVRGEVFLTKKEFYRINKEQEEKGQKLFANPRNIAAGSVRQ
LDPKVTASRKLDSYQYAFVTNIGQTTHEEEHLLLKAFGFKTNPHNKSLTSLEDVFAFRDW
WDHHREKIDYEIDGIVVMINDNATWGALGIVGKAPRGGIAYKFSPQEATTVIEDIKVQVG
RTGTLTPVAVMRPVTVGGVTISHATLHNADQIERLGLKIGDTVVISRAGDVIPQITEVLK
DMRTGKERVFTMPQSCPADGSPVVRDGVAYRCSNKKCGARNSENIRHFVSRSAFDIRGLG
PKIIDRFMDEGLISDAADIFTLTEGDIKTLERFGDKSAENIIREIAEHKKITLPRFLYSL
GIIHVGEETSRALASALPISNFEFQILNLISAIQNMSLVALREIPDIGAVVATSIHEWFF
DHHNLDLLHRLETLGVTLETVRTPAGTKFRGKIFVLTGSMESMSRNEAKEKIRALGGELS
ESVSKKTSYVVAGETPGSKLQKAQQLGVPILTEKEFLALV
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaggatgaggcatccaatcgcataattcaactccgcaagacaatcaaccaccat
cggtatctgtatcatgtcctagacgaacaggaaatttcggatgcggcactcgattcactt
aaaaaggagctgttcgacctcgaacagcaatatccggaatttataacacctgactccccg
acccagcgcgtagggggtacaccgctcaaggcattcaaaaaagtggctcacgaggcacag
atgctttcgttcaatgacgcattctcccaagaagatatgcgcgactggatgaagcgtaat
gaaaattatctctctcaacctccctcccctcaaatctccaactccttacttccaacctct
aatctcttctatggtgagcttaaaatcgacggatttgccattgagcttttatatgaagat
ggcaccctaaaacaagcatcgacgcgaggggatggaatcatcggagaagacgttacacag
aacattagaactgttgaggcgatccctttggagctcatatcggctaacaaggcgcgcgcc
aatgcaaaaaaactcggacttgcaatagataagttcgatttcaccgcaaagcatcttgtc
gtgcggggagaggtgtttctcacaaaaaaagaattttatcggataaataaggagcaagaa
gaaaaaggacaaaagctgtttgcaaacccgcgcaatattgccgcaggatcggtgagacaa
ctcgatcccaaggtaacggcgtcccgcaagcttgattcgtatcagtatgcattcgtgaca
aacataggacaaacaacgcacgaagaggaacacctgctcctaaaggcgtttggattcaaa
acgaatccgcacaacaaatcactcacatcactggaagatgttttcgcctttcgcgactgg
tgggatcatcaccgcgaaaagatcgactacgagatagatggcattgtcgttatgatcaat
gacaatgcaacgtggggcgcactcggcattgtcggcaaggcaccacgaggcggcatcgca
tacaaattctctccccaagaagcaacgacggtcattgaggatattaaggtgcaggtgggg
cgcactggcacactgactcccgttgcggtcatgcgcccagtcaccgtaggaggagtgaca
atatcacacgcaaccttacacaatgccgaccagattgaacgcctagggctcaagatcgga
gatacggttgttatcagccgagcaggcgacgtcatccctcaaataacggaagtactaaag
gatatgcgcacaggaaaagagcgtgtattcacaatgccacagagctgtccagcagacggc
tcccctgttgtacgcgacggagtcgcatatcgatgctcgaacaaaaaatgcggcgcgcgc
aacagcgaaaacattcgccactttgtatctcgatcagctttcgacattcgagggctcggc
ccgaagattattgatcgcttcatggatgaaggcttgatatctgatgcagccgatatcttt
acattgaccgagggtgacattaaaaccctcgaacgcttcggggacaagtcggcagaaaat
atcattcgcgaaatcgcagaacataaaaaaataacacttcctcgctttctctatagcctt
ggaatcattcatgtcggagaagaaaccagtcgcgcacttgcaagcgcactcccaatttca
aattttgaatttcaaattttaaatttaattagtgcgatacaaaacatgtcattagttgca
ttgcgagaaatccccgatataggcgcggtagtagcaacaagtatccatgaatggtttttc
gatcatcacaacctcgacctcctgcatcggctcgaaacactgggggtcacacttgagact
gtccgcacgccagccggaacaaagtttcgggggaaaatcttcgtattgactgggtcaatg
gaatccatgtcgcgcaatgaggcgaaagaaaaaattagagcgcttggaggagagctgtct
gaatcagtaagtaaaaaaaccagctatgtcgtagcgggagagacccccgggagtaaactc
caaaaggctcagcaactcggagtccccatcttaaccgaaaaggagtttcttgcattagta
taa
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