Polynucleobacter wuianus: A8O14_02775
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Entry
A8O14_02775 CDS
T09802
Symbol
ligA
Name
(GenBank) DNA ligase (NAD(+)) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
pwu
Polynucleobacter wuianus
Pathway
pwu03030
DNA replication
pwu03410
Base excision repair
pwu03420
Nucleotide excision repair
pwu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pwu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A8O14_02775 (ligA)
03410 Base excision repair
A8O14_02775 (ligA)
03420 Nucleotide excision repair
A8O14_02775 (ligA)
03430 Mismatch repair
A8O14_02775 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pwu03032
]
A8O14_02775 (ligA)
03400 DNA repair and recombination proteins [BR:
pwu03400
]
A8O14_02775 (ligA)
Enzymes [BR:
pwu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
A8O14_02775 (ligA)
DNA replication proteins [BR:
pwu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
A8O14_02775 (ligA)
DNA repair and recombination proteins [BR:
pwu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
A8O14_02775 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A8O14_02775 (ligA)
MMR (mismatch excision repair)
DNA ligase
A8O14_02775 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
A8O14_02775 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
HHH
PTCB-BRCT
Nlig-Ia
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
ANI99109
UniProt:
A0A191UDL6
LinkDB
All DBs
Position
515763..517778
Genome browser
AA seq
671 aa
AA seq
DB search
MSSNSPTNLAERYAFLQVELARLEHAYYVLDNPLLPDIEYDRLYRELLDIEAVHPEWVTP
ESLSQRVGGTALKEFDSVTHEVPMLSLNNAFEESELIAFDRRCREGLHADQVDYAGELKF
DGLAISLRYENGSLVRAATRGDGASGEDVTANIKTIRAIPLKLTGKNIPKVLEVRGEVFM
YLKDFEKMNRQAAELGEKEFANPRNAAAGSLRQLDSKITAKRPLSFFAYGLGALEPQSWL
PKTHEELLNTYAELGLPVCSERRVLQSVKEILAFYEEVGTKRDSLPYDIDGVVYKVNSFA
EQAKLGFVSRAPRFALAHKYPAQEALTTVLGIDVQVGRTGAITPVARLAPVEVGGVTVTN
ATLHNEDEVKRKDVRIGDTVSVRRAGDVIPEVVSVIKDCRPTDAKEFQMPTRCPVCDSHI
ERLADEAVARCSGGLFCGAQRKQALIHFAHRRALDIEGLGEKIVDQLVDQNLVRTPADLY
RLGFTALANLERMGEKSADNLVQAINQSRNTTLARFIFALGIRHVGETTAKDLANHYRSM
HALMDADMEDLLSVKDVGPVVADSITSFMQEAHNREVIEQLLASGMQLSVEEKVISAALA
GKTFVLTGTFPTMTRDEAKDLLEKAGAKVAGSVSKKTDYVVAGTDAGSKLTKAEELGVPV
IDESAMLALLR
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgtccaatagtccgacaaatttagcggagcgctacgcattcctgcaggtagaactt
gctcgcctagagcatgcctactatgtgctcgacaaccctttgctaccggatattgaatat
gaccgtctctatcgtgagttattggatattgaagcagtccatccagagtgggttacacct
gagtctctatctcagcgtgtaggcggcaccgctttaaaggagtttgattcggtcacccat
gaagtgcctatgctttcgctcaataatgcatttgaagaatctgaactcattgcctttgat
cgtcgttgtcgtgaaggcttgcatgcagaccaagttgattatgcaggtgaattgaagttt
gatggtttagcaatctcacttcgttatgaaaatggctccttagtaagggctgctactcgt
ggtgatggagccagcggtgaagatgtcaccgcaaatattaaaaccattcgcgccattcca
ctaaaattgacaggaaaaaatatccccaaagtattagaggttcgtggcgaggtcttcatg
tatcttaaggacttcgaaaaaatgaatcgccaggcagccgagcttggtgaaaaagaattt
gctaacccgcgtaatgctgcagcaggcagtctacgtcaattagactctaagatcactgca
aaaagacccttgtctttctttgcatatggcttgggtgctctagagccacagtcatggcta
cccaaaacccatgaagagttgctcaacacctacgcagagttaggtctgccggtttgttcg
gagcgcagagtgcttcaatctgtaaaagagatattggctttctacgaagaggttggtact
aagcgtgattcattgccctatgacattgatggtgttgtctataaagtgaactcctttgca
gagcaagcaaagcttggttttgtatctagggcaccacgctttgcactggctcataagtat
ccagctcaagaagcgctcacgacagttttgggtattgatgtgcaggttgggcgcacgggt
gctattacgcctgtagctagactagctccagttgaggtcgggggtgtgacggtcactaat
gccacgcttcataacgaagacgaagttaagcgcaaggatgttcgtattggcgatactgtg
tcggttcgcagagccggggatgtgattcctgaagtggtctcagtgatcaaagattgcagg
cccactgatgccaaagagtttcaaatgcctacacgctgcccggtatgtgattcacatatt
gagcgtttggccgatgaagcagtggcacgttgtagcggtgggttattttgtggtgcacag
cgcaaacaggcacttattcactttgctcataggagagcattagatattgaaggcttgggc
gagaagattgtggatcaattggtggatcaaaatctcgttagaacgccagccgatctttat
cgcttgggttttactgctctagcaaacctagagcgtatgggtgagaagtctgcagacaat
ctcgttcaggccatcaaccaatccagaaacactacgctagctcgatttatctttgccttg
ggtattcgtcatgtgggtgagacaactgcaaaagatttagccaatcactatcgatccatg
cacgccttgatggatgctgacatggaagatcttctaagtgttaaagatgttgggccagta
gttgccgactccattaccagttttatgcaagaagctcacaatcgtgaagtgatcgagcaa
ctcctagcttccggaatgcaactctccgtggaggagaaagtcattagtgcggccttggct
ggtaagacctttgtattgacgggaacatttcctacgatgacaagggatgaggctaaagat
cttcttgagaaggcaggggcaaaagttgcaggatctgtttccaagaaaacagactacgta
gttgcaggtaccgatgctggcagcaagctcactaaagccgaagagttgggtgtaccagtt
attgatgaatcggcgatgctggctttattaaggtag
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