Pseudomonas xanthosomatis: KSS93_14625
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Entry
KSS93_14625 CDS
T07606
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
pxa
Pseudomonas xanthosomatis
Pathway
pxa00270
Cysteine and methionine metabolism
pxa00450
Selenocompound metabolism
pxa00670
One carbon pool by folate
pxa01100
Metabolic pathways
pxa01110
Biosynthesis of secondary metabolites
pxa01230
Biosynthesis of amino acids
pxa04980
Cobalamin transport and metabolism
pxa04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pxa00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
KSS93_14625 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
KSS93_14625 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
KSS93_14625 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
KSS93_14625 (metH)
04980 Cobalamin transport and metabolism
KSS93_14625 (metH)
Enzymes [BR:
pxa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
KSS93_14625 (metH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
CdhD
MtrH
Motif
Other DBs
NCBI-ProteinID:
QXH44136
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Position
complement(3287963..3291670)
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AA seq
1235 aa
AA seq
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MSDRSARLKALQKALKERILILDGGMGTMIQSYRLEEHDYRGTRFADWPSDVKGNNDLLL
LSRPDVIAAIEKAYLDAGADILETNTFNATQISQADYGMEALVYELNVEGARVARQVADA
KTLETPDRPRFVAGVLGPTSRTCSISPDVNDPGYRNVTFDELVENYVEATRGLIEGGADL
LLIETIFDTLNAKAAIFAVQQVFEEDAVELPIMISGTITDASGRTLSGQTTEAFWNSVRH
AKPISIGLNCALGAKDLRPYLEELSGKADTHVSAHPNAGLPNAFGEYDETPAEMAAVVEE
FAASGFLNIIGGCCGTTPGHIQAIAEAVAKYPPRAIPEIPKACRLSGLEPFTIDRQSLFV
NVGERTNITGSAKFARLIREENYTEALEVALQQVEAGAQVIDINMDEGMLDSQAAMVRFL
NLIAGEPDISRVPIMIDSSKWEVIEAGLKCIQGKGIVNSISMKEGVEQFKHHARLCKRYG
AAVVVMAFDEVGQADTAARKKEICQRSYDILVNEVGFPPEDIIFDPNIFAVATGIEEHNN
YAVDFIEACAFIRDHLPHALSSGGVSNVSFSFRGNNPVREAIHSVFLYHAIRNGLTMGIV
NAGQLEIYDEIPAALREKVEDVVLNRTPHGTDALLAIADDYKGGGATKEVENEEWRSLPV
EKRLEHALVKGITAFIVEDTEECRQQCARPIEVIEGPLMSGMNVVGDLFGAGKMFLPQVV
KSARVMKQAVAHLIPFIELEKGDKPEAKGKILMATVKGDVHDIGKNIVGVVLGCNGYDIV
DLGVMVPAEKILQTAREQKCDIIGLSGLITPSLDEMVHVAREMQRQGFNLPLMIGGATTS
KAHTAVKIEPKYSNDAVVYVTDASRAVGVATQLLSKELKAGFVERTRSEYVEVRERTANR
SARTERLSYSQAIAAKPQYDWAGYQPAVPSFTGVKVLDNIDLRELAEYIDWTPFFISWDL
AGKFPRILTDEVVGEAATALYKDAREMLDKLIDEKLISARAVFGFWPANQVKHDDIEVYA
DNGDTLATLHHLRQQTIKPDGKPNWSLADFVAPKDSGVTDYVGGFITTAGIGAEEVAKAY
QDKGDDYSSIMVKALADRLAEACAEWLHERVRKEHWGYAKDEHLDNEALIKEQYSGIRPA
PGYPACPDHTEKETLFRLLDGSAIGETGPSGVFLTEHFAMFPAAAVSGWYFAHPQAQYFA
VGKVDKDQIEQYSLRKGQEVGVSERWLAPNLGYES
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaccgcagcgctcgtttaaaagcactccagaaagcactcaaagagcgcatcctg
atcctcgacggcggcatgggtactatgatccagagctaccgcctcgaggaacacgactat
cgtggcacgcgctttgccgattggccaagcgatgtgaagggcaacaacgacctgctgctg
ctcagccgccccgatgtgatcgccgccatcgagaaggcctacctcgatgcgggcgccgat
attcttgaaaccaacaccttcaacgccacgcagatttcccaggccgactacggcatggaa
gcgctggtgtacgagctcaacgtcgagggcgcgcgggttgcccgccaggtggccgacgcc
aagaccctcgaaaccccggaccgcccacgcttcgtcgccggcgtgcttggcccgaccagc
cgcacctgctcgatttcccccgacgtcaacgaccccggataccgcaacgtcaccttcgac
gagttggtggaaaactacgtcgaggccacccgcggcctgatcgagggcggcgccgacctg
ctgctgatcgaaaccattttcgacaccctcaacgccaaggcggcgatcttcgccgtgcag
caggtgttcgaggaagacgcggtcgagctgccgatcatgatctccggcaccatcaccgac
gcgtccgggcgcaccttgtccgggcaaaccaccgaggcgttctggaactcggtgcgccac
gccaaaccgatctccatcggcctgaactgcgccctgggcgccaaggacctgcgcccctac
ctcgaggagctgtccggcaaggccgacacccatgtgtccgcccaccccaacgccggcctg
cccaacgccttcggcgagtacgacgagaccccggccgaaatggccgcggtggtcgaagaa
ttcgccgccagcggctttctcaacatcatcggcggctgctgcggtaccaccccgggccac
atccaggccatcgccgaggccgtggccaagtacccaccgcgcgcgatccccgagatcccc
aaggcctgccgcctgtcgggcctggagccgttcaccatcgatcgccagtcgctgttcgtc
aacgtcggcgagcgcaccaacatcacaggttccgccaagttcgcccggctgatccgtgaa
gagaactacaccgaagcgctggaagtggcgctgcagcaggtcgaggccggcgcccaggtg
atcgacatcaacatggacgaagggatgctcgactcccaggcggccatggtgcgcttcctc
aacctgatcgccggtgagccggacatctcccgcgtgccgatcatgatcgactcctccaag
tgggaggtgatcgaggcgggcctcaagtgcatccagggcaagggcatcgtcaactcgatc
tcgatgaaagaaggcgtcgagcagttcaagcaccacgcccgcctgtgcaagcgctacggc
gccgccgtggtggtgatggccttcgacgaggtcggccaggccgacaccgccgcacgtaaa
aaagagatctgccagcgcagctacgacattctggtcaacgaagtgggcttcccgccggaa
gacattatcttcgacccgaacatcttcgccgtggccaccggtatcgaggagcacaacaac
tacgccgtcgatttcatcgaggcctgtgccttcatccgcgaccacctgccccacgccctg
agctcgggcggtgtgtccaacgtgtcgttctcgttccgtggcaacaacccggtgcgcgag
gcgatccattcggtgttcctctaccacgccattcgcaatggcctgaccatgggtatcgtc
aacgccggccagctggagatctacgacgagatccccgccgcgctgcgcgagaaggtcgag
gacgtggtgctcaaccgcactccgcacggcaccgacgccctgctggccatcgccgacgac
tacaagggcggcggcgccaccaaggaagtcgagaacgaagagtggcgctcgctgccggtg
gaaaagcgcctcgagcacgccctggtcaagggcattaccgcgttcatcgtcgaagacacc
gaagagtgccgccaacagtgcgcgcgccccatcgaggtcatcgaaggcccgctgatgagc
ggcatgaacgtggtcggcgacctgttcggcgccggcaagatgttcctgccgcaagtggtc
aagtcggcccgggtgatgaagcaggccgtggcccacctgatcccgttcatcgagctggaa
aaaggcgacaagcccgaggccaagggcaagatcctgatggccacggtcaagggcgacgtg
cacgacatcggcaagaacatcgtcggcgtggtgctgggctgcaacggctacgacatcgtc
gacctgggcgtgatggtgccggccgagaagattttgcagaccgcccgcgagcagaagtgc
gacatcattggcttgtcgggcctgattaccccgtcgctggacgaaatggtccacgtggcc
cgcgagatgcagcgccagggcttcaacctgccgctgatgatcggtggcgccaccacctcc
aaggcgcacacggcggtgaagatcgagcccaagtactccaacgatgccgttgtctacgtc
accgacgcctcgcgcgcggtgggtgtggccacgcagttgctgtccaaggagctcaaagcc
ggcttcgtcgagcgcacccgcagcgaatacgtcgaggtgcgcgagcgcaccgccaaccgc
agcgcccgtaccgagcgcctgagctacagccaggccatcgctgccaagccgcagtacgac
tgggccggttaccagccggcagtaccctccttcaccggcgtgaaggtgctggacaatatc
gacctgcgcgagctggccgagtacatcgactggacgccgttcttcatctcctgggacctg
gccggcaagttcccgcgcatcctcaccgacgaagtggtcggcgaggcagccaccgcgctg
tacaaggacgcccgcgagatgctcgacaaactgatcgacgagaagctgatcagcgcccgg
gcggtgttcggtttctggccggccaaccaggtcaagcatgacgacatcgaggtctacgcc
gacaacggtgacaccctggccaccctgcaccacctgcgccagcagaccatcaagccggac
ggcaagccgaactggtcgctggccgacttcgtggcaccgaaggacagcggcgtgaccgac
tacgtgggtggtttcatcaccaccgccggtatcggcgccgaggaagtggccaaggcttac
caggacaagggtgacgactacagctcgatcatggtcaaggccctggccgaccgcctggcc
gaggcctgcgcagagtggttgcacgagcgggtgcgcaaggagcactggggttatgccaag
gacgagcacctggacaacgaggcgctgatcaaggagcagtacagcggtatccgccctgcc
ccgggctacccggcctgcccggaccacaccgagaaggaaacgctgttccgcctgctcgat
ggcagcgccatcggcgagacgggccctagcggggtgttcttgaccgagcactttgccatg
ttcccggcggcggcggtcagtggctggtactttgcgcacccgcaggcgcagtactttgcg
gtgggcaaggtggacaaggaccagatcgagcagtacagcttgcgtaaggggcaggaggtt
ggggtcagtgagcggtggttggcgcctaatcttgggtatgagagctga
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