Pseudomonas xanthosomatis: KSS93_16325
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Entry
KSS93_16325 CDS
T07606
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
pxa
Pseudomonas xanthosomatis
Pathway
pxa01501
beta-Lactam resistance
pxa01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pxa00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KSS93_16325
01503 Cationic antimicrobial peptide (CAMP) resistance
KSS93_16325
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pxa02000
]
KSS93_16325
01504 Antimicrobial resistance genes [BR:
pxa01504
]
KSS93_16325
Transporters [BR:
pxa02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
KSS93_16325
Antimicrobial resistance genes [BR:
pxa01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
KSS93_16325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
EF_assoc_2
Motif
Other DBs
NCBI-ProteinID:
QXH44452
LinkDB
All DBs
Position
complement(3652882..3656004)
Genome browser
AA seq
1040 aa
AA seq
DB search
MPQFFIERPVFAWVVALFILLLGGLSIPQLPVAQYPDVAPPQVEIYAVYPGASAATLDES
VVSIIEQELNGADNLLYFESQSSLGSATITASFQPGTNPDLAQVDVQNRLKVVESRLPRA
VTQQGLQVEKVSTGFLLLATLTSEDGRLDEIALSDILARNVMNEIRRVKGVGKAQLYGSE
RAMRIWIDPARLVGFNLTPNDVAVAIAAQNAQVAPGSIGDLPARPTQEITANVVVKGQLS
TPEEFAAIVLRANADGSSVTVGDVARVEVGAQDYQYGTRLNGKATSAFSVKLSPGANAMQ
TAALVKAKLNELSHYFPEGVRIDIPYDTSPFVKVSIQQVINTLLEAMVLVFAVMFLFLQN
LRYTLIPTLVVPVALMGTLAVMSALGFSVNVLTLFGMVLAIGILVDDAIVVVENVERIMA
EEGLPPKQATRKAMGQISGAIIGITLVLVAVFLPMAFMKGSVGVIYQQFSVSMAVSILFS
AFLALSLTPALCATLLKPVAKGEQHGRKGFFGAFNRGFERMSDGYQRWVGHALARSGRYL
LLYAALLGVLGYGFSQLPTAFLPTEDQGYTITDIQLPPGASQARTIEVARQIEAHNSDEA
SVANTTLILGFSFSGSGQNAALAFTTLKDWAERGADDSAQAIADRANLAFSGLKDAIAFA
VLPPPVDGLGESTGFEFRLQDRGGMGYSALMQARDQLLEQARNSKVLVNVREASLAESPQ
VVLEVDRRQANALGVSFADIGAVLDTAVGSNYVNDFPNQGRMQRVVVQAEGERRSQVEDL
LKIHVRNASGKMVPLGAFVSAQWQSGPVQLTRYNGYPAVSISGEPAAGYSSGEAMAEVER
LVAQLPGGAGLEWTGLSLQERLSGSQAPLLMALSLLVVFLCLAALYESWSIPTAVLLVVP
LGVLGAVLAVTLRGLPNDVFFKVGLITLIGLSAKNAILIIEFAKALVDDGMDATAAAIQA
ARLRLRPIVMTSLAFILGVVPLAIASGASSASQQAIGTGVIGGMLSATIAVVFVPVFFVV
VMKLAGRRQRQQAENLASDS
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaatttttcatcgagcgcccggtgttcgcctgggtggtcgcgttgttcatcctg
ctgcttggcgggctgtcgatcccgcagttgccggtggcccagtaccccgacgtggcgccg
ccgcaggtggagatctacgccgtgtacccgggcgcctcggcggcgaccctggacgaaagt
gtggtgagcatcatcgagcaggagctcaatggcgccgacaaccttttgtacttcgagtcg
cagagcagccttggcagcgctaccatcaccgccagcttccagccgggcaccaacccggac
ctggcccaggtcgatgtgcaaaaccgcctgaaagtggtcgagtcgcgcctgccgcgcgcc
gtcacccagcagggcttgcaggtggagaaggtgtccaccggctttctgctgctggccacc
ctcacctccgaggatggccgcctggacgagatcgccctgtcggatatcctcgcgcgcaac
gtgatgaacgagatacgccgggtcaagggcgtgggcaaggcccagctgtatggctcggaa
cgggccatgcgtatctggatcgacccggccaggcttgtgggcttcaacctgacccccaac
gatgtggccgtggcgattgccgcgcagaacgcccaggtggcgccgggcagcatcggcgac
ctgccggcccggcccacccaggagatcaccgccaacgtggtggtcaagggccagctgagc
acccctgaggagttcgccgccatcgtgctgcgggccaatgccgatggctccagcgtgacc
gtcggtgatgtggcgcgggtcgaggtcggcgcccaggactaccagtacggcacccgcctc
aacggcaaggccaccagcgccttcagcgtcaagctgtcgcccggggccaacgccatgcaa
accgcagccctggtcaaggccaagctcaacgagttgtcgcactacttccccgaaggcgtg
cgcatcgacatcccctacgacacctcgccgttcgtcaaggtgtcgatccagcaggtgatc
aacaccctgctggaggccatggtgctggtgtttgcggtgatgttcctgttcttgcagaac
cttcgctacaccctgatccccaccctggtggtgcccgtggcactgatgggcaccctggcg
gtgatgagcgcgctgggcttttcggtcaacgtgctgaccctgttcggcatggtgctggcc
atcggcattctggtggacgatgccatcgtggtggtggagaacgtcgagcggatcatggcc
gaagagggcctgccacccaagcaggcgacgcgcaaggccatgggccagatcagcggggcg
atcatcggcatcaccctggtgctggtggcggtgttcctgccgatggcgttcatgaagggc
tcggtgggcgtcatctaccagcagttctcggtgtcgatggcggtgtcgatcctgttctcg
gcgtttctcgccctgagcctgaccccggccttgtgcgccaccctgctcaagccggtggcc
aagggcgagcagcacgggcgtaaaggcttctttggcgcgttcaaccgtggtttcgagcgc
atgagcgacggctaccagcgctgggtcggccatgccctggcccgcagcggccgctacctg
ctgctgtacgcggcgctgctgggtgtgctgggttacggtttcagccagttgcccacggcg
tttctgcccaccgaggaccagggctataccatcaccgatatccagctgccgccgggcgcc
agccaggcgcgcaccatcgaggtggcacggcagatcgaggcgcataacagtgatgaggcc
agcgttgccaacaccacgctgatcctgggcttcagtttttccggcagcgggcagaatgcc
gccctggcgttcaccacgctgaaggactgggccgagcgcggcgccgacgacagcgcccag
gccatcgccgaccgcgccaacctggcgttcagcgggctcaaggacgccatcgcctttgcc
gttttgccgcccccggtggacggcctgggcgagtccaccggttttgagttccgcctgcag
gaccgtggcggcatgggctacagcgcgctgatgcaggcccgcgaccagttgctcgaacag
gcgcgcaacagcaaggtgctggtcaacgtgcgcgaagcctcgctggccgaaagcccgcag
gtggtgctggaggtcgaccgccgccaggccaatgcgctgggcgtgtcgttcgccgacatt
ggcgcggtgctggacacggcagttggctccaactacgtcaacgacttccccaaccagggg
cgcatgcagcgggtggtggtgcaggccgagggcgagcggcgcagccaggtcgaggacctg
ttgaagatccacgtgcgcaacgccagcggcaagatggtaccgctgggcgccttcgtcagc
gcccaatggcagtcgggcccggtgcagctcacccgctacaacggctacccggcggtgtcg
atctctggcgagccggcggccggctacagctcgggcgaggcgatggccgaggtcgagcgc
ctggtggcgcaattgccaggcggtgcgggccttgaatggaccggtttgtcgttgcaggag
cgcctgtccggcagccaggcgccgctgttgatggcgctgtcgctgctggtggtgttcctg
tgcctggcggcgctgtacgaaagctggtcgatccccactgcggtgctgctggtggtgccg
ttgggagtgctgggcgcggtgctggcggtgaccctgcgcgggctgcccaacgatgtgttc
ttcaaggtcggcctgatcaccctgatcggcctgtcggcgaagaacgccatccttatcatc
gagttcgccaaggcgctggtcgatgacggcatggacgccactgcagcggccatccaggct
gcgcgcctgcgcctgcggccgatcgtcatgacttcgctggcgttcatcctcggcgtggtg
ccgctggccatcgccagcggcgccagttcggccagccagcaggccattggcacgggggtg
atcggcggcatgctcagcgcgaccattgccgtggtgttcgtgccggtgttcttcgtggtg
gtgatgaagctggccgggcggcgccagaggcaacaagccgagaacctggccagcgatagc
tga
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