Pyrus x bretschneideri (Chinese white pear): 103928262
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Entry
103928262 CDS
T03446
Name
(RefSeq) transcription factor PIF3-like isoform X1
KO
K12126
phytochrome-interacting factor 3
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb04075
Plant hormone signal transduction
pxb04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
103928262
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
103928262
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pxb03000
]
103928262
Transcription factors [BR:
pxb03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
103928262
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
103928262
NCBI-ProteinID:
XP_009335548
LinkDB
All DBs
Position
Unknown
AA seq
716 aa
AA seq
DB search
MPLSELYRMAGRVDSSQDFENDFLELVWENGQVMMQGQSSRTRKNPSFNSLPSFSNPKNR
DRDVGNGNIGKTGKFGSVVDSGLDEIPLSVPSSEMGLSEDDDMLPWLNYSIDEPLHHEYC
HDFLPEFSSATANEASTNHNLASIDKRSSSSQVFRDSNSNSAHEGACLQQRNVGKVPLNG
GADVSRPRSGATQLYSLSSQRSQASFPSFRSRVSDTAGDNTSSATHRGVGKNSTHISSAG
GSPGMKIPRPDPVTPSNNNPSIVNFSHFSRPAALAKANVQTNGVMAGSGSSSMIRIANKD
KFSSATSNSLPESMLIDSSSSAPKESNSQCQQILVRSSVELKPTEAKHLEEPCTAKRSEG
TCQEETSKNDINSNHIPCESAVRVSPNGEKTVEPVVASSVCSGNSVERGSDDPTQALKRK
FRETDESECHSDDVEEEYMGVKKGAHARGMGSKRSRAAEVHNLSERKRRDRINEKMRALQ
ELIPNCNKVDKASMLDEAIEYLKTLQLQLQMMSMGAGMYMPPMMLPPGMQHMHGPCMAHF
SPMGVGMGMGMGMGLGMGFGMGMPDMIGASSSYPMLQVPPMQGAHFPGSHMAGHTAFNGM
MGSNLQMFGLPSQGVPVPMQRAPLAPSSAGPFVKSSGGLNASSSGGPVENVESAPVSGSK
DSVQNMNSQAMQNSNANSSMNQTSSQGQATNEGFAQSALVRNNVQATDVNNNRADG
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgcctttgtccgagctttatcggatggccggaagggttgattcaagtcaagattttgaa
aatgattttcttgagttggtatgggaaaatggtcaggttatgatgcagggtcagtccagt
agaactaggaagaatccgtcttttaatagcttaccgtcttttagcaacccaaaaaatcga
gatagagatgtaggaaatggcaatattgggaagacaggaaaatttgggtctgtggtggat
tctggattggatgaaattccgttgtcagtgccatcttctgagatgggtttgagtgaggat
gatgacatgttgccttggttgaattattccattgatgagcctttacatcatgagtactgc
catgattttttgcctgaattttctagtgcaactgcaaatgaggcttccaccaatcacaat
cttgcctcgatcgataagaggagtagttctagtcaggtgtttagggattccaattccaat
tctgcacatgaaggtgcttgtttgcaacaaaggaatgtgggaaaggttcctttgaacggt
ggtgctgatgttagcagacctagatctggtgctactcagttgtattcgttatcatcgcag
cgatcccaagcgtcgtttccatcttttagatcaagggtttcggatactgctggtgataat
acaagtagtgccactcatcgtggtgttggcaagaattcaactcatatttcatctgcaggc
gggtctcctggaatgaagataccgaggccagatccagtaacgcctagcaataataatcca
tccatagtgaacttttcccatttttcacgaccagctgctcttgcgaaagctaatgttcag
accaacggtgtgatggctggctcaggttcatcaagcatgataaggattgcaaataaggac
aagttttcatctgcaactagtaacagtctgcccgagtcaatgctaattgattccagcagt
agtgcaccaaaggagtcaaattcacaatgccaacagattctagtgagatccagtgttgaa
ttgaaaccaacagaagctaagcatcttgaggaaccatgtactgctaagcggtctgaggga
acatgccaagaggaaacctctaagaatgacataaattccaatcatattccttgtgaaagt
gcagttagggtatctccaaatggtgaaaaaactgtggagccagttgttgcttcttctgtt
tgctcaggcaatagtgtggagagaggttcagatgacccaacacaagctttgaagagaaaa
tttcgtgagactgatgagtctgaatgccatagtgatgatgtagaggaagaatacatgggt
gtgaagaaaggagctcatgctcgaggtatgggttccaagagaagcagagcagcagaagtg
cataatttatcagaaaggaagcgaagggacagaatcaatgagaagatgcgtgcgctacag
gaactcatacccaattgcaataaggtggacaaagcttcaatgctggatgaggctattgag
tatttgaagacgcttcaactccaattacagatgatgtcaatgggggctggtatgtatatg
ccaccaatgatgttaccaccaggaatgcaacacatgcatggaccctgtatggctcatttc
tcgcccatgggtgttggaatgggaatgggaatgggaatgggattaggcatgggttttggg
atgggtatgcccgacatgattggtgcatcttctagttaccctatgcttcaggtgcccccc
atgcaaggagcacatttccctggttcacatatggcagggcacaccgccttcaatgggatg
atgggatctaaccttcagatgtttgggcttcctagtcaaggagttccagtgccgatgcaa
cgtgctcccttagctccctcatcggcaggtccctttgtgaagtcatctggaggactaaat
gcaagcagttcaggaggacctgtggaaaatgtggaatcagctccagtttctggttcaaag
gattcagttcagaacatgaactcacaagcgatgcaaaacagcaatgccaatagctctatg
aatcaaacatctagtcagggccaagcaactaatgagggatttgcacagtctgcattggtg
cgaaataatgttcaagcgactgatgttaacaacaacagagctgacggatag
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