Pyrus x bretschneideri (Chinese white pear): 103928771
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Entry
103928771 CDS
T03446
Name
(RefSeq) ABC transporter I family member 19-like
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103928771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxb03019
]
103928771
Messenger RNA biogenesis [BR:
pxb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
103928771
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
nSTAND3
ORC-CDC6-like
AAA_28
NACHT
AAA_15
AAA
AAA_24
PduV-EutP
AAA_18
AAA_23
AAA_22
nSTAND_NTPase5
AAA_25
AAA_5
Arf
AAA_14
AAA_33
SRP54
AAA_30
Sigma54_activat
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
103928771
NCBI-ProteinID:
XP_009336129
LinkDB
All DBs
Position
Unknown
AA seq
287 aa
AA seq
DB search
MAEEASSGIRVQGMQFAYDAQPPLFCDFNLEITPGSRCLLIGANGSGKTTLLKILAGKQM
VGGRDVVRVLNCSAFHDTHLVCSGDLAYLGGSWTKTVGSAGELPLQGDFSAEHMIFGVEG
TDPVRRDKLIELLDIDLRWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEVTVDLDVVARM
DLLDFFKEECEQRGATIVYATHIFDGLETWATHLAYIQDGELKRAEKLSEVNELKSSVNL
LSVVESWLRAETKSDKKKSSNPPAQMKKASPFASSPFTSSRHMAYYR
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagaggcatcgagcggcatcagagtccagggcatgcaatttgcgtacgacgcg
cagcccccgctcttctgcgatttcaacctcgagataacccctggatcccgatgccttctc
atcggcgccaatggatctggtaagaccacgttgctgaagattctagctgggaagcagatg
gtgggagggagagatgtggtgcgagtgttgaattgttcagcttttcatgacacgcatttg
gtttgcagtggcgatttggcttacttgggtggctcttggaccaaaactgttggctctgct
ggagaacttcccttgcagggagatttctcagctgagcatatgatttttggagtcgaaggg
actgatcctgttaggagagataagttgattgagctgcttgatatagacctgcggtggaga
atgcataaagtatctgacgggcaacggcgtcgagtccaaatctgcatgggacttcttcat
ccctttaaggttctcttgcttgatgaggtaacagtcgacttggatgtcgttgctaggatg
gacttactagatttcttcaaggaagaatgtgagcagagaggagctacaattgtatatgca
acccatatctttgatgggttggagacatgggcaacgcatctggcttacatccaagacggt
gagctaaagagggctgagaagttgtcggaggttaatgaattgaagagttcggtcaatctg
ctctctgttgttgaatcctggctccgcgccgagaccaagtctgacaaaaagaaatcctca
aatccccctgcccaaatgaaaaaggcctctcctttcgctagttctccattcacgtcatca
aggcacatggcgtattaccgctga
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