Pyrus x bretschneideri (Chinese white pear): 103955840
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Entry
103955840 CDS
T03446
Name
(RefSeq) transcription factor PIF3-like isoform X1
KO
K12126
phytochrome-interacting factor 3
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb04075
Plant hormone signal transduction
pxb04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
103955840
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
103955840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pxb03000
]
103955840
Transcription factors [BR:
pxb03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
103955840
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
103955840
NCBI-ProteinID:
XP_009366015
LinkDB
All DBs
Position
Unknown
AA seq
713 aa
AA seq
DB search
MPLSELYRIAGRVDSSQDLENDFLELVWENGQVVMQGQSSRTRKNPSCNSLPSYNTPKNR
DRDVGNSNIGKTGKFGSVVDSGLDEIPLSVPSSEMGLSEDDDMLPWLNYSIDEPLHHEYC
HDFLPEFSSATANEASSNHNLASIDKRSSSSQVLRDSNPNSAHEDASLQQRNVGKVALIG
RADVSRPRTGTSQLHSLSSQQSQASYPSSRSRVSDTAGDNISATHRGVGKNSNQISSTGG
FPGMKMQRQDPVIPRNTNPSIMNFTHFSRPAALAKANVQNNGAMAGSGSSSMEKIGDKDK
FSAATRNNLPESMLIDSSSGAPKESNSQCQPILVRSSDELKPTETKTLEEPCTAKRSEGA
CQEETSKNDINANDKPCESASRVSPGGEKTLEPVVASSVCSGNSVERGSDDPPHALKRKC
RETDESECHSDDVEDESVGVKKGVHARGTGSKRSRAAEVHNLSERRRRDRINEKMRALQE
LIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGMYMPPMMLPPGMQHMHGPRVAHFS
PMGVGMGMGMRLGMGFGMGMPDMNGASSSYPMLQVPPMQGAHFPGSHMAGHNAFNGMMGS
NLQMFGLPSQGVPMQMQYAPLAPSSGGPLVKSSAGLNAGSSGGPVENVESAPVSGSKDLV
QNMNSQVMQNNNANSSMNPTSSQGQAINEGFGQTVLVGNNVQAADANNNRANR
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgcctttgtccgagctttatcggatagccggaagggttgattcaagtcaagacttagaa
aatgattttcttgagttggtatgggaaaatggtcaggttgtgatgcaaggtcagtccagt
agaactaggaagaatccatcttgtaatagcttaccgtcttataacaccccgaaaaatcga
gatagagatgtaggaaatagcaacattgggaagacagggaaatttgggtctgtggtggat
tctggattggatgaaattccgttgtcggtgccatcttctgagatgggtttgagtgaggat
gatgacatgttgccttggttgaattattccattgatgagcctttacatcatgagtactgt
catgattttttgcctgaattttctagtgcaactgcaaatgaggcttcctccaatcataat
cttgcctcgatcgataagaggagtagttctagtcaggtgcttagggattccaatccgaat
tctgcacatgaagatgctagtttgcaacaaaggaatgtgggaaaggttgctttaattggc
cgtgctgatgttagcagacctagaactggtactagtcaattgcactcgttatcatcgcag
caatctcaagcatcgtatccatcttccagatcaagggtttcagatactgctggtgataat
attagtgccacccatcgcggtgttggcaagaattcaaatcagatttcatctacgggcggt
tttcctggaatgaagatgcagaggcaagatcctgtaatacctagaaacactaatccatcc
ataatgaactttacccatttttcacggccagctgctcttgcaaaagctaatgttcagaac
aacggtgcaatggctggctcaggttcatcaagcatggaaaagatcggagacaaggacaaa
ttttcagctgcaactaggaacaatctgcctgagtcaatgctaattgattcaagcagtggt
gcaccaaaggagtcaaattcacaatgccaaccaattctagtgaggtccagtgatgaattg
aagccaacagaaacaaagactctcgaggaaccatgtactgctaagcggtctgagggggca
tgccaagaagaaacctctaagaatgacataaacgccaatgataaaccttgtgaaagtgct
agtagggtatctccgggtggtgaaaaaacactggaacctgttgttgcttcttctgtttgc
tcaggcaatagtgtggagagaggttcagatgacccaccacatgctttgaagagaaaatgt
cgtgagactgacgagtctgaatgccatagtgatgacgtagaggatgaatctgtgggtgtc
aagaaaggagtgcatgctcggggcacaggttccaagagaagcagagcagcagaggtgcat
aatttatcggaaaggaggcgaagggacagaatcaatgagaagatgcgtgcgctacaggaa
ctcataccgaattgcaataaggtggacaaagcttcaatgcttgatgaggctattgagtat
ttaaagacgcttcaactccaagtacagattatgtcaatgggagctggtatgtatatgcca
ccaatgatgttaccaccaggaatgcaacacatgcatggaccccgtgtggctcatttctca
cccatgggtgttggaatgggaatgggaatgagattaggcatgggttttgggatgggtatg
cccgacatgaatggtgcatcttctagttaccctatgcttcaggtgccccccatgcaagga
gcacatttccctggttcacatatggcagggcacaacgccttcaatgggatgatgggatct
aaccttcagatgtttgggcttcctagtcaaggagttcctatgcagatgcaatatgcgccc
ttagctccctcatcaggaggtccccttgtgaagtcatctgcaggacttaatgcaggcagt
tcaggaggacctgtggaaaatgtggaatcagctccagtttctggttcaaaggatttggtt
cagaacatgaactctcaagtgatgcaaaacaacaatgccaatagctctatgaatccaaca
tctagtcagggccaagcaattaatgagggatttggacagactgtattggttggaaataat
gttcaagcggctgatgctaacaacaacagagctaacagataa
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integrated database retrieval system
