Pyrus x bretschneideri (Chinese white pear): 103959726
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Entry
103959726 CDS
T03446
Name
(RefSeq) nuclear pore complex protein GP210-like isoform X1
KO
K14314
nuclear pore complex protein Nup210
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103959726
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxb03019
]
103959726
Messenger RNA biogenesis [BR:
pxb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103959726
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_GP210_15th
Ig_GP210_16th
Ig_NUP210_1st
Big_2
Ig_NUP210_7th
Ig_NUP210_5th
Ig_NUP210_2nd
Ig_NUP210_16th
Ig_NUP210_3rd
Ig_NUP210_9th
Ig_NUP210_15th
Motif
Other DBs
NCBI-GeneID:
103959726
NCBI-ProteinID:
XP_009370364
LinkDB
All DBs
Position
Unknown
AA seq
1969 aa
AA seq
DB search
MDSVRQMNMLRYTVLLGLSLLLVAGQTASHLGSGPHIADVNILLPPRMTHPVEYRLQGSD
GCFKWSWDHHDILSVLPEYNSTSHCSTSALLRSIAPFSGRKETAVYAADVNTGVVIRCKV
FIDKLSRIQIFHNSVKLDLDGLATLRVRAFDSEENVFSSLVGLQFMWQLETNELPHHLAH
VPLKDSPLSDCGGLCGDLDIQISLEDNGVFSDLYVVKGIEIGHEIVSVNLLEPRFQHMTD
RIALTVAEAMSLDPPSPVFVLVGAAVQYSLKIIRGNKAQVVTLPSPHHRWSVSNSSVARV
DSMMGLANAFSLGITNTIVEDTRVAGHIQVSSLNVVLPDSLSLYMVPLSTSGNLVEGIEA
IPSMTRWYGVSGRQYLIQMKVFSQGPDAQEIYLTESDDLKLSSDQSDYWRLSPVSNDIAI
KHGWQNSMILKATSQGQGKLAASLTYFSALNEKKEVLKVMQEVVVCDQVQFTLDKSGASP
TILLPWAPSVYQEVELKATGGCAQASSDYKWFSSDMGIVSVSASGVVQAKKPGKATIKVL
SSFDSFNYDEVAIEVSVPASMVMLRNFPVETVVGTHLQAAVTMKASNGAYFYRCDAFSSF
IKWKAGSESFIIVNATVEAPTLDNLGNAEFYATSSGPACSRAYLYASASGRATLHATLSK
EYHNLDSSFSGPVVLKASSLIAAYSLLSIRQAGDGNHFGGYFFDLAQTETDRQLVNLDKI
YLVPGTHLDVMLLGGPEKWNNGIDFVETMDILNEGHGHIDNGASVQWLSDSYKSLYRVSC
QKLGTYKIVFKRGNLVGDGHPLPAVAEVLLYLTCSIPTSIVLLADEHVNEREVIRTAIQA
DRSSGKIRVTPVTVANGRTIRLAAVGISNSGEAFANSSSLSLGWELINCGEMASWDDADD
LERSKHSWERLLSLKNESGLCIVRATVIGFRDNMGAHKSVPLLEDSDNVLTDAIRLQLVS
TLIVSPEFNLVYFNPNAKLNLSITGGSCFLEATVNNSRVLEVVQPPTGLQCSQLILSPKA
MGTALVTVYDIGLAPPLAASAVVQVVDIDWIKIVSPEEISLMEGNSQTIDLMAGISDGRT
FDAYQFAYMNIHVHVEDHIIEVLDINDISSPGGGFVNVPKFKILATHLGITTFFVSAVQQ
SGHEILSQPIMVEVYAPPVIYPQEIFLVPGASYVLTVKGGPTVGVYVEYLSLDDAIVTMH
RSFGRLSAMSPGNTTIRATFFRNGNIVICEAYGSVKVGVPSSVTLNAQSDLLGVGHEMPI
YPLFSEGDLFSVYELCQNYRWTIEDEKVLSFYLEHFTGEKYGSQLERSEKIQFPSHMNEE
ELGFIKVVSGRFAGRTNVAVSFSCEFISSGSKSWRRVYNASLSISVVPDLPLALGVPITW
VLPPHYTTTSILPSSSELHGQRDSQSHKGIIIYSLLKNLPEKNEGVEKDAISIDGDRIKT
SESNNLACIQAKDRMTGRIEIAACIKVAEVSQIRITNKELPFHWINLAVGAEISLPVVYL
DVIGNPFYEAHGATLFDVATNSPDVVSINNSSNTHGGGGNIHLKAMRQGRALVRISIHHM
PQKSDYILISAGAHIHPQNPVLRTGSHINFSIEGLNDEISGRWGTANGSVISVSPLSGVA
EVVGEGTTQVYFEASSLKLRTTVIVPTEDIISVDAPTETLTNVPFPTKGYNFYVKISTDN
KFKALGNTKELQYDCRVDPPFVGYAKPWLDLDTGSSYCRFFPYSPEHLVRLVPKSKDMKS
DISVSINASLREADHVSGSASALFVGGFSILEMGKDSMQLKLTPDSNKTTITILGNTDVE
IYWHERDSLLITPIHKEGSGIGGHAKYEVRMLGSKRFKDTIFITLPANGQSVEIDVNGDP
GDKTASETTINHTLWATVLGCLALSGLTVAFTICYSANRLDRSQTSINAPATPSTAGPAT
PERTSSPAAGSEQSPRTPQRFIDYVRRTIDETPYYRREPRRRVNPQNTF
NT seq
5910 nt
NT seq
+upstream
nt +downstream
nt
atggattcagtgcggcagatgaacatgttgagatacactgttttgctcggtttgtctctt
cttctggtggcgggccaaacggcgtcgcatttgggctccggtccgcacattgcagacgtc
aacattctgctgcctcccagaatgactcatccggtcgagtatcggctccaggggagcgat
ggttgcttcaaatggtcatgggatcaccacgacattctgtctgttctgccggaatataac
tcaactagtcactgctcgacgagtgcactattgagatcaattgctccgtttagtggccgg
aaggaaactgctgtttatgctgctgatgtaaatactggagttgtgattcgctgcaaagtt
tttattgacaagctttctaggattcagatatttcataattctgttaaacttgacttggat
gggcttgccacgcttcgagttcgcgcctttgacagcgaagaaaatgtgttttcgtcactg
gtgggattgcaatttatgtggcagctggaaaccaatgaactgcctcaccaccttgctcat
gttcctctaaaggattctcccctgagtgactgtggtgggttgtgtggagacctagatatc
caaataagccttgaagataatggtgtattttccgatctgtacgttgtaaagggaatcgaa
attgggcatgagattgtttctgtaaatttgcttgagccacgattccagcacatgactgac
agaattgctcttactgtggcagaagccatgtcacttgatcctccctcacctgtttttgtc
ctcgttggtgctgctgttcagtatagtctaaaaattatccgtgggaacaaggctcaagtg
gtaactttgccgtctccacatcatcgatggtctgtttcaaactcttctgttgctcgtgtg
gactctatgatgggtttggctaatgcgtttagcttaggaattacaaacaccatagttgaa
gatacaagggttgctggccacatacaagtgtcgtcacttaatgttgttctgccagattct
ttatctttatacatggtacctttgtctacttctggcaatcttgttgagggaattgaagca
attccatccatgacacgttggtatggtgtttctggccgtcagtacctcattcaaatgaag
gttttctcacaaggtccagatgcacaagaaatctatcttacagagagtgatgatttaaag
ttgtccagtgaccagtctgactactggagactttctcctgtatcaaatgatattgcaatc
aaacatggctggcagaattctatgatcctgaaggcaacttcacagggacagggtaaattg
gcagcttctttgacttactttagtgcattaaatgagaagaaggaggttctcaaggtcatg
caagaagtcgtggtttgtgatcaagtccagtttactttggataaaagtggtgcatctcca
accattctccttccgtgggccccttctgtttatcaggaggtggagctaaaggctacagga
ggttgtgctcaagcatccagtgactacaaatggttctcttcagacatgggtatcgtgtct
gtatctgcttctggggttgtccaggctaagaagcctggtaaagctaccattaaagtgcta
tccagttttgattcatttaattatgatgaggttgccattgaagtctctgttccagcatct
atggtcatgcttcgtaacttccctgttgagactgttgtaggaacacatcttcaagctgct
gtaacaatgaaggcatcaaatggtgcctacttttatagatgtgatgcattcagctccttc
ataaagtggaaagcagggagtgagtctttcattattgtcaatgcaacagttgaggcaccc
actttagacaatttagggaatgctgagttctatgcaacaagttctggtcccgcatgttca
cgggcatatttatatgcctcggcttctggtcgggcaacccttcatgctacattatcaaaa
gaatatcacaacttggatagctcttttagtgggcccgttgttttaaaagcatcttcactt
attgcggcatattcactgcttagcattcgtcaggcaggtgatggaaaccattttggtggc
tacttttttgatttggctcaaacagaaactgataggcagttggtaaatttggacaaaata
taccttgtccctggaacgcatctggatgttatgcttcttggtggacctgaaaagtggaac
aatggtattgactttgttgaaactatggatatcttaaatgaaggacatggtcatattgac
aatggggcttctgtgcaatggttatctgatagctataagagtctgtacagagtttcatgt
caaaagctgggaacctataaaattgttttcaaacgtggtaatctggttggggatggccat
cctctacctgcagtagcagaagttctgctgtatcttacgtgtagcattcctacctcaatt
gttctgctagctgatgaacatgtaaatgaacgtgaagttatacggactgcaattcaggct
gatcgcagttctgggaaaatccgtgtcacccctgttaccgtggcaaatgggcgcaccatt
agattagctgctgttggtattagtaactctggagaagcatttgcaaactcatcttctctt
tccttggggtgggaacttatcaattgtggcgagatggctagttgggatgatgctgatgat
ttagagaggtcgaagcacagttgggagaggttattgagcttgaaaaacgagtcaggcctg
tgtatagttcgtgcaactgtcattggtttcagagataacatgggtgctcataagtctgtt
ccactgcttgaggattcagataatgttcttacagatgcaattcgtctacagcttgtttct
acattaattgtcagcccagagttcaatctggtgtatttcaatcccaatgctaagttaaac
ctgtcaattactggtgggagctgtttcttggaagctactgtgaataattctcgagtactg
gaagtcgttcaacccccaacaggtttacagtgctcacaactgatcctgtctcctaaagct
atggggacggcacttgtgacagtttacgatattggacttgctcctccccttgcggcttct
gctgtggtacaagttgtagacattgactggataaagattgtgtcaccagaggaaataagc
cttatggaagggaactcgcagactattgatttgatggctgggattagtgatgggaggact
ttcgatgcttatcagtttgcctacatgaatattcatgtgcatgttgaggatcatattatt
gaggtgttagacattaatgatatctcaagcccaggtggtggatttgttaatgtcccgaaa
tttaagattttggctacacatcttgggatcaccactttctttgtgagtgctgtacaacaa
tctgggcatgaaattttgagtcaaccaataatggtggaagtttatgcaccacctgtaatc
tacccacaagaaattttccttgtacctggagcatcttatgtgcttaccgtgaaaggagga
ccaacagttggtgtatatgttgaatatttgagtctggatgatgcaatagtgacaatgcat
cgatcttttggacggctgtctgctatgtcacctggaaacactactattcgtgccacattc
ttcagaaatggaaatattgtgatttgtgaagcatatggcagtgttaaagttggagttcct
tcttcggtgacactgaatgcacaaagtgatctgcttggtgttggccatgagatgccaata
tatcctttattttctgagggtgatttgttttctgtttatgagctctgccaaaactaccgg
tggactatagaagatgaaaaggttttgagcttttatttagagcacttcactggtgagaag
tatggttctcagttggaacgttcagaaaagattcaattccctagccatatgaatgaggaa
gagcttggttttatcaaagtcgtatctggaagatttgcagggagaacaaacgttgcagtc
tcattctcatgtgaatttatatcttctggttccaaatcatggagaagagtttacaatgca
tctctatcaatatcggtggtgcctgatctccctcttgctcttggagtcccaataacctgg
gttcttcctcctcattatactacaacaagtattttaccttcatcttcagaattgcatggc
caaagggatagtcagagtcataaaggaattattatctattccttattaaaaaatctcccc
gaaaagaatgaaggtgtggaaaaggatgctatttccatcgacggagacagaataaagaca
tcagagagtaacaatcttgcatgcattcaggcaaaagatcgtatgacgggtagaattgag
attgctgcttgcatcaaagttgctgaggtgtctcaaataagaattacgaacaaggagtta
ccatttcactggatcaatcttgctgttggtgctgaaatttctcttccagtagtctacctt
gatgtgataggaaaccctttctatgaagcacacggtgccactctctttgatgttgcaacc
aactctcctgatgttgtgtccataaacaacagcagcaacacgcatggtggcggtggaaat
atccatctcaaggcgatgcgacagggtagagctcttgtgcgaatatccatccatcatatg
cctcagaagtcggactatatcctgatatcagcgggtgctcatatacatcctcaaaaccca
gttcttcgaacaggaagccatattaacttcagtatagaaggcttaaatgatgaaatttct
ggccgttggggaactgcaaatggaagtgtcatatctgtatccccattgtctggggtggct
gaagtagttggggaaggtacaactcaagtatattttgaagcttcaagtttgaagttgcga
acaacagttatagtgccaacagaggatattatttctgtggatgctccaactgagacacta
acaaatgttcccttcccaactaaaggatataacttctatgtgaagatcagtaccgacaac
aagtttaaggcgcttggaaacactaaggaactccagtatgactgtagagttgacccgcct
tttgttgggtatgcaaaaccatggttagatcttgataccggtagctcatactgccgcttt
tttccttactctccggagcatctggttcgtttggtacccaagtcaaaggatatgaaatca
gatatatctgtttccatcaatgcttcactgagagaagcagatcatgtttccggatctgct
tctgctctttttgttggagggttttccattttagagatgggcaaggattcaatgcagttg
aagctgaccccagactctaacaagactactattacaatcctgggaaacacagatgttgaa
atctattggcatgagcgggattctttactcattactcccatccataaagaaggttctggg
atcggtgggcatgcaaaatatgaggtcagaatgctaggatccaagagattcaaagataca
attttcattacacttccagccaatggtcagagtgtggaaattgatgtcaacggcgaccct
ggagataaaacggcatctgaaactaccatcaatcatacactttgggcaacggtgcttgga
tgtcttgctctatcgggtttgacagttgctttcaccatatgttattcggcaaacagactg
gatagatctcaaacatccattaacgctccagccactccaagcactgcaggcccagccaca
cccgaacgtactagcagcccagctgctgggagcgaacagtctcctcgaacacctcagcgg
ttcatagattacgttagaagaacaatagacgaaactccatactacaggcgagagccgcgg
aggagagttaatccacagaatacgttctag
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integrated database retrieval system
