Pseudoalteromonas xiamenensis: J5O05_15175
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Entry
J5O05_15175 CDS
T07215
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pxi
Pseudoalteromonas xiamenensis
Pathway
pxi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pxi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J5O05_15175 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pxi03400
]
J5O05_15175 (nth)
Enzymes [BR:
pxi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
J5O05_15175 (nth)
DNA repair and recombination proteins [BR:
pxi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
J5O05_15175 (nth)
Prokaryotic type
J5O05_15175 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_8
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QTH71142
UniProt:
A0A975HKP6
LinkDB
All DBs
Position
complement(3138728..3139363)
Genome browser
AA seq
211 aa
AA seq
DB search
MNKDKRIEILTRLRDENPNPETELEYTSPFELLVAVTLSAQATDVSVNKATRKLFPVANT
PEAIVALGVDGLKEYIKTIGLFNSKANNVVKLSQILVEQHNSEVPENREALEALPGVGRK
TANVVLNCAFGWPTIAVDTHIFRVSNRTNFAKGKDVVEVEKKLDKVVPKEFKVDVHHWLI
LHGRYVCTARKPKCGSCLIEDLCEFKEKTDC
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaagacaaaagaatcgagatcctaacgcgtctcagagatgaaaacccaaatcct
gaaactgagctggaatatacctcgccttttgagttacttgtcgccgtcaccttatctgca
caagcaacggacgtaagcgtcaacaaagcgacaagaaagctctttcctgtcgcaaataca
cctgaggcaatcgtcgcgctgggtgtcgatggcctaaaagaatacatcaaaaccatcggt
ttatttaattcgaaagccaacaatgtcgtgaagctctcacaaattcttgtcgagcaacac
aactctgaagtacctgaaaatcgcgaagcgctcgaggcgctgcctggcgttggtcgtaaa
acggccaatgtggtccttaactgcgctttcggctggcctacgattgctgtcgatacccat
attttccgcgtatccaaccgcaccaactttgccaagggcaaagacgtggtggaagtcgaa
aagaaactcgacaaagtcgtgcctaaagaatttaaagtggatgtccatcactggcttatc
ctacatggtcgctacgtgtgtaccgcccgcaaacctaaatgcggtagctgcttaattgaa
gacttgtgtgagtttaaagaaaaaacagattgctga
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