Pseudoalteromonas sp. Xi13: EJ103_07900
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Entry
EJ103_07900 CDS
T10490
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pxsi Pseudoalteromonas sp. Xi13
Pathway
pxsi01501
beta-Lactam resistance
pxsi01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pxsi00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EJ103_07900
01503 Cationic antimicrobial peptide (CAMP) resistance
EJ103_07900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pxsi03036
]
EJ103_07900
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pxsi02000
]
EJ103_07900
01504 Antimicrobial resistance genes [BR:
pxsi01504
]
EJ103_07900
Chromosome and associated proteins [BR:
pxsi03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
EJ103_07900
Transporters [BR:
pxsi02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
EJ103_07900
Antimicrobial resistance genes [BR:
pxsi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
EJ103_07900
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_RND_2
BSH_RND
YknX_C
BSH_CzcB
HH_EMRA
Biotin_lipoyl
BSH_LcnD
BSH_YknX
Beta-barrel_RND
RND-MFP_C
PYNP_C
BSH_CusB
Motif
Other DBs
NCBI-ProteinID:
AZN32651
LinkDB
All DBs
Position
1:1751953..1752969
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AA seq
338 aa
AA seq
DB search
MKSQNFLIAVLSSLLFFSLPAKSANVVVQKIALESAKQQVQAVGNTEAIHSVVMYPAVGD
RVTGVFFKPGDKVKKGDTLLELDSRRQKAALDEAKIKLADTQRILKRLEQSQAKGAVPKS
DVDDAKTVVELAKVTLIQAQTELEDRKVIAPINGIMGLTDIEVGDRITELTPIATIDDTT
SLYINFNAPESAISMLRNKSSLIVFPWQSDTAINADIAYLDSRVDPQTRTLRVKAKLNNE
KQQFLPGMSFRVHIEVLGEHFAAVPEAALLWGATGPYVWTSVDKKATRVDVKIEQRLAGR
LLVSGSLNKGDILVIEGVQRLRAGQELSFNLPAQDTQE
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatcgcaaaactttttaatcgctgtgctcagttcgctgctgtttttcagccttcct
gcaaagagcgcgaacgttgttgtacaaaaaattgccctcgaaagtgctaaacaacaagtg
caagcggtaggaaatacagaggcaattcattcggttgtaatgtaccccgcagtaggcgat
agagtcacaggcgttttttttaagccaggtgataaagtaaaaaaaggcgatactttactc
gaacttgattctcgtaggcaaaaagcagcgcttgatgaggctaaaattaaacttgccgac
acccagcgaatactaaaacgattagaacaaagtcaggccaaaggcgcagtgcctaaaagc
gatgttgatgatgctaaaaccgttgtagagcttgccaaagtcacccttatacaggctcaa
actgagcttgaagacagaaaagtaattgcgccgataaatggcattatgggtttaacagat
attgaggtaggcgatagaataaccgagctaacccccatcgccacaatagatgacacaaca
agcttgtacataaattttaacgcaccggagtcggctatcagtatgctgcgaaataaaagc
agcttaattgtgtttccttggcaatcagacactgccattaacgctgatattgcctattta
gactcacgcgtagacccacaaacccgtactttacgtgttaaagccaagctaaataatgaa
aaacaacaatttttacctggtatgagctttagagtacatattgaagtgttaggcgagcat
tttgctgcagttcctgaggctgcattactgtggggggcaacaggcccgtatgtatggacc
agcgttgataaaaaagccacacgtgttgatgtaaaaatagagcagcgcttggcggggcga
ttattggtttctgggtcgttaaataaaggcgatattttagtaattgaaggggtacaacgc
ttacgtgcaggccaagagctaagctttaatttacccgcgcaagatacgcaggagtag
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