Pseudoalteromonas sp. Xi13: EJ103_07905
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Entry
EJ103_07905 CDS
T10490
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
pxsi Pseudoalteromonas sp. Xi13
Pathway
pxsi01501
beta-Lactam resistance
pxsi01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pxsi00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EJ103_07905
01503 Cationic antimicrobial peptide (CAMP) resistance
EJ103_07905
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pxsi02000
]
EJ103_07905
01504 Antimicrobial resistance genes [BR:
pxsi01504
]
EJ103_07905
Transporters [BR:
pxsi02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
EJ103_07905
Antimicrobial resistance genes [BR:
pxsi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
EJ103_07905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Motif
Other DBs
NCBI-ProteinID:
AZN32652
LinkDB
All DBs
Position
1:1752972..1756052
Genome browser
AA seq
1026 aa
AA seq
DB search
MKQQPMMQDLPSMAIRRPVLIVVLNLLIIIAGIAAIAGVEVRELPDVDRPRITVSAPFPG
GSPETVDTEVTSKLEGAVARVSGVKSIRAQSEEGNARIVVEFRPGINLDDAANETRESVA
RVERDLPEEVERVSIIKADNDAEAVVSLTVSSESLSLEALTERVNVDLAPQFLTIPGVAD
VRLNGDRERVLRVRIDPLKLSSFNLTVPDVAQVLSQAPFDVPAGSLKSNDQQIIVRADAT
SITPEQVGDIIIQGDTRISDIAAVYFGPADPRSMVRLNGKPVIGMEIIRQAQSNTIEISD
EVLKLITSMQTRFPEMEFTLTSDDAQFIRSSVDEVIYSLLLTVLLVVVTLWVFIGSWRAT
LVPAFAIPVALIGSLALIWALGFSINILTLLALVLATGLIVDDAIVVSENIQRQRGLGLG
RRAAAVIGTREVFFAVVATTAVLAAVFIPIAFLPSTAGRLFREFGGVLAGAVIISSFVAL
SLVPALTSKLKLKHGGFHPFAKLGHWLGGIYTKTIHKVLNHAWLTFALCLLVAAGSGALY
ASLDSELLPTEDRGKIRIFARGPDGVGLNFMDRQAIKMEDILLPFVDSGEIESIYTVVGQ
WDPNIVFITVPLKHWDERHFSQQEIINKIRQPLGDIPGAPAYPGGANSLNLRGQGGGVEI
ALLGQDYLQIFKAAQQFSAALEKAVPEVAPVRISYQPSQPQLRVNIDRRRAQELGVSLDD
IAITLRAAINGDDVEDLNIGDQSVPIMLQAQNQTINSPSDLANLYIRAGNGSLVPLSSVA
YISEEGVAAELERHAQRRSIELSMELPESLTIAALVEQIKTVSEQSLEPGIALAFKGEAL
TYEETSSEVLVTYVLAFLIVFLVLAAQFENVNSAIVVMITVPFGITSAILALYLTGTSLN
IYSQIGLVMLIGLIAKNAILLVEFADQLRDQGLTVRKAVEQAALVRLRPITMTLISTLLG
ALPLILSTGAGAEARNAIGWVVFGGLALAVLFTLYLTPVIYLGLARFTTPRGDESKQLAQ
ELEKID
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagcaacctatgatgcaagacttaccctcaatggcgattcgccgcccagtactt
attgtggtgcttaacttattaattattattgcaggtattgccgctattgcgggtgttgaa
gtaagagagcttcctgatgtagatagaccacgtattacggtttcggcgccatttcctggt
ggctcgcctgagaccgttgataccgaagtaaccagcaaattagaaggcgcagtagcgcgt
gtaagtggcgttaaatcgatacgcgcacaaagtgaagagggaaatgcacgtattgtggtc
gaatttagaccaggcataaatttagatgacgccgcgaatgaaacgcgtgagtctgttgca
cgtgtagagcgagaccttccagaggaagtagagcgtgtttctatcattaaggccgacaac
gacgccgaagcagttgtatctctgactgtttcaagtgaaagtttatcgcttgaagcactt
accgagcgggtaaatgttgacttagcgccgcaatttttaactattccaggtgtcgcagat
gttcgcttaaacggagatagagaacgcgtattaagagtacgaatagacccgctaaaacta
agtagctttaatttaacagtgcccgatgtagcacaagtgcttagccaagcgccgtttgat
gtgccagcagggagtttaaagtcaaacgatcagcaaattattgtacgtgccgatgcaacc
tctattactccagagcaagttggcgatatcataatacaaggcgatacccgaattagtgat
attgcggctgtgtattttggccctgccgatccgcgctctatggtaaggctaaatggtaag
cccgttattggtatggaaattattcgacaagcacaatcaaatacaattgaaatatcagat
gaagtgctcaagcttattacaagtatgcaaacacgctttccagaaatggaatttacactt
acctccgatgacgcacaatttataagaagctcagtagatgaagtaatttactctttatta
cttacagtattgttagtggttgtgactttgtgggtatttattggctcttggcgcgccact
ttagtgcctgcttttgctattcctgttgccttaataggttctttagcacttatatgggca
ctgggtttttcaataaatattttaaccttgttggcgcttgtattagccactggcttaatt
gttgatgatgccatagtagtaagtgaaaatattcagcgccagcgggggctaggtttaggg
cgtcgggcagctgctgtaataggcacgcgcgaggtattttttgctgttgtagcaaccacg
gctgtacttgctgctgtatttatacctattgcgtttttaccttctactgccggtcgctta
tttagagagtttggtggagtacttgccggtgcggtaattatatcaagctttgtggcactt
tcattagtgcctgctcttacctccaaattaaagttaaagcacggcggttttcacccattt
gctaaactaggccattggttgggtggtatttatacaaaaacaattcataaagtgcttaac
catgcgtggcttacgtttgcgctctgtttattggttgcagcaggatccggagcgttgtac
gccagtttagacagtgagcttttgcccacagaagaccgagggaaaattcgtatatttgca
cgtggcccagatggtgtagggctaaactttatggataggcaagcgataaaaatggaagat
attttacttccgtttgtcgatagcggcgaaattgagtctatttatactgtggtaggccaa
tgggaccctaatattgtgtttattactgtgccattaaagcattgggatgagcgccatttt
agccaacaggaaattattaataagatacgccagccacttggcgatattccaggagcaccg
gcttacccaggtggggctaatagtttaaatctacgtggtcaagggggaggcgttgaaata
gcgttgcttgggcaagattatttgcaaatatttaaagcggctcagcagttttctgcggca
ttagaaaaagccgttcctgaggtggcacctgtgcgtatttcgtatcagccatcgcaacca
caacttagagtaaatatagacagacgccgtgcacaagagctcggtgtatcgctagacgac
attgccattaccttgcgcgcagcaataaatggcgacgacgtagaagatttaaacattggc
gatcagtctgtgccaattatgctacaagcgcaaaaccaaaccataaacagtccaagtgat
ttggctaatttatatatcagagcgggtaatggcagtttagtaccattaagtagtgtggcc
tatatttctgaagaaggcgtggctgcagagcttgagcgtcatgcccagcgccgctcaata
gagctcagcatggagttgccagaatcgttaaccattgccgctttagtagagcaaataaaa
acggtgtctgagcaatcgttagagccaggtattgcacttgcgtttaaaggcgaagcgcta
acgtatgaagaaacatccagtgaagtacttgtaacttatgtacttgcttttttaattgta
tttttagtattggctgctcaatttgaaaatgtaaatagtgccattgtggttatgataacc
gttccctttggtattacctcggccatattagcgctttatttaaccggcacgtcgttaaat
atttactctcaaattggtttagtgatgctgataggcttaatcgctaaaaacgcaattttg
cttgttgaatttgcagaccaattacgcgatcaaggtttaacggtcagaaaagccgtcgag
caagctgcgttggtacgtttacgcccaattacgatgacccttatatctactctacttgga
gcattgccgttaattctctctacaggcgcaggggctgaagcccgaaatgcaattggctgg
gtggtgtttggcggcttagcacttgcggtgttgtttacgctttatcttactccggtaatt
tacttgggcttagcacgctttaccacgccaaggggggatgaatctaagcagctcgcacaa
gagcttgaaaaaatagactaa
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