Papilio xuthus (Asian swallowtail): 106117234
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Entry
106117234 CDS
T07456
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
pxu
Papilio xuthus (Asian swallowtail)
Pathway
pxu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pxu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106117234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pxu03041
]
106117234
Spliceosome [BR:
pxu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
106117234
Complex C
U5 SnRNP specific factors
106117234
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
FANCL_d3
Roc
TniB
Ras
Motif
Other DBs
NCBI-GeneID:
106117234
NCBI-ProteinID:
XP_013166880
UniProt:
A0A194PW55
LinkDB
All DBs
Position
Unknown
AA seq
976 aa
AA seq
DB search
MDGDLYDEFGNYIGPDLESDSDEEQSVYGQDNRDADEDAMDEDEEGDAEPEAAPMSVVLH
EDKRYYPQAVEVYGPDVETVVQEEDTQALDKPLVEPVKQKKFQVQEQQLPETTYDMEYMA
DMLDNTNLMRNITLMGHLHNGKTSFVDCLIRQTHPGTVNNETTIPMRYTDTLFVEQERGV
SIKSMPVTLLLKNIKGKSHLLNIMDTPGHVNFSDEVTAALRISDGAVLFVDAAEGIMLNT
ERLLRHAVQERVPLTICINKIDRLILELKLPPADAYYKLRHIIDELNSLVETNQPQDNPD
EPPTIFSPLLGNVCFASSLYDVCFTLESFAAMYASAHVTSGLRASDMAAWLWGDVYFNAK
TRRFTKKSPHASAQRSFVEFILEPLYKIFAQVVGDVDDTLPAVLAELGIKLTKQESKLNV
RPLLRLVCSRFFGDFSGFVEMVCRHIPSPLDAAERKVAHCYRGSEGALRDSMLGCDQSGP
LVAHTTKMYPTDDCTFFLVLARIMSGTLYAGQAVRVLGENYSAQDEEDSRLMNVGRLWIY
EARYKVELNRVPAGCWALIEGIDQPIVKTCTLVAAEETETLHTFRPLRFNTHAVVKIAVE
PVNPSELPKMLDGLRKVNKSYPLLSTRVEESGEHVVLGTGELYLDCVMHDLRNMYSEIDI
KVADPVVSFCETVVETSSLKCFAETPNKRNKLTMIAEPLERGLAEDIEAGAVCVTWDRKR
LGEFFQNKYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKHLLASVKDSIVQGFQWG
TREGPLCEEPIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVAYSAFLMATPRLMEPYLF
VEVQAPADCVSAVYTVLAKRRGHVTQDAPVPGSPLYTIKAFVPAIDSFGFETDLRTHTQG
QAFCLQTFHHWQIVPGDPLDKSIVIRPLEPQPATHLAREFMIKTRRRKGLSEDVSINKFF
DDPMLLELARQDVQLN
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atggacggagacttatatgatgagtttggtaattacatcggacctgacttggaatcagat
tcagacgaggagcagagtgtttatggccaggataatcgtgatgctgacgaggatgcgatg
gatgaagacgaggagggtgatgcagaacctgaagctgctccaatgtccgtggtcttacat
gaagacaaaagatactatccacaagctgtggaagtgtacgggccagatgtagagacagtg
gtccaagaagaggatacacaagctttagacaagcctctagtagaaccagtgaagcagaaa
aagttccaagtgcaagaacagcagctgccggagaccacatatgatatggagtacatggca
gatatgctggataacactaatttaatgaggaatattactttgatggggcatttgcataat
ggcaaaacttcatttgtagactgtttaataagacagacccatcctggtacagtaaataat
gaaacaactatacccatgagatacactgacacattgtttgtggaacaagagagaggtgta
tctattaagtctatgcctgtcacactcctgttgaagaacatcaaaggcaaatcacatcta
ctgaacataatggatactccaggacatgtgaacttcagtgatgaggttactgctgcattg
aggatatcagatggagctgtattatttgttgatgctgcggaaggtataatgttaaacaca
gaacgtctcttacgacatgcagtacaagaacgagtaccactcacaatatgcatcaataaa
attgaccgtctcatacttgagctgaagttaccccctgcggatgcttactacaaactacgg
catatcattgatgagttgaactcattggtggaaaccaaccagccacaggataaccctgat
gaaccaccaactatattctcaccgctactaggcaatgtctgttttgcatcatctttatat
gacgtatgcttcactctggaatcattcgcggcgatgtacgcctccgcgcacgtgaccagt
ggacttcgtgcatcagatatggcggcctggctatggggagatgtttacttcaatgccaag
acaaggcgcttcaccaagaagtcaccgcatgcatccgcgcaacgaagttttgttgagttt
atattggagccgttatataaaatatttgcacaggtggttggtgatgtagatgacacatta
ccagcagttcttgcggagttaggcattaagttaactaagcaagaatctaaactcaatgtc
cgtccgttattgagacttgtctgcagccgcttctttggtgattttagtggtttcgtggag
atggtatgccggcacatcccgtccccgctggacgcggcagagcgcaaggtggcgcactgc
taccgcggcagcgagggcgcgctgcgtgactccatgctcggctgtgaccagagtggaccc
ctcgtcgctcacaccaccaagatgtatcctaccgatgattgcacattcttcttggtattg
gcgcgcataatgtcgggcacgctgtacgcggggcaggcggtgcgcgtgctgggcgagaac
tacagcgcgcaggacgaggaggactcgcgcctcatgaacgtcggccggctgtggatatat
gaggctaggtacaaggtggaactgaaccgcgtgccggctgggtgctgggcgctgatcgag
ggcatcgaccagccgatagtgaaaacgtgcacgctggtggccgccgaggagacggagacg
ctgcacacattccgcccgctgcggttcaacacgcacgccgttgtcaagatcgctgtagag
ccggtcaatccctcggaactaccaaagatgttggatggactaaggaaggtgaacaagtcg
tacccgctgctgtcgacgcgcgtggaggagagcggcgagcacgtggtgctgggcacaggc
gagctctacctggactgcgtcatgcacgacctgcgcaacatgtactccgagattgatatc
aaggtcgctgaccctgtggtatcgttctgtgagacggtggtagagacatcatcactgaag
tgcttcgcggagacgcccaacaaacgcaacaagctaacgatgatcgcggagccgctggaa
cgcggtctggccgaggatatagaagcgggcgccgtttgcgtcacctgggaccgcaagcgc
cttggagagttcttccagaacaaatacgactgggatttgttagctgcccgttctatatgg
gcgttcggaccggacgcgacggggcccaacattctggtggatgacacgctgccctcagag
gttgacaaacatctcctcgcctccgtcaaagactccatcgtacaagggttccaatggggt
acgcgcgagggtcccttgtgcgaggagccgatccgcaacgtcaagtttaagatcctggac
gcggtgatcgcacaggagccgctgcatcgcggtggtggacagatcatacctacggctaga
cgagtagcatattcagcgttcctgatggcgacgccgcgcctcatggagccctacctcttt
gtagaggtgcaggcgcccgccgactgcgtgtcagccgtgtacaccgtgcttgctaaacga
agaggtcacgtgacgcaagatgcgccagtgcccggctcgccgctgtacaccataaaggca
ttcgtgcccgccattgactcgttcggcttcgagacggacttgcgcacgcacactcagggc
caggccttctgcctacaaacattccaccattggcagatcgtgccaggtgacccgctagat
aagagcatcgttataagaccgctagaaccgcaaccggctacgcacctggcgcgtgagttt
atgatcaagacgaggcgacgcaagggccttagcgaggacgtctctatcaacaagttcttc
gacgaccccatgttgctcgaactcgccagacaagatgtacaactcaattag
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