Plutella xylostella (diamondback moth): 105392096
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Entry
105392096 CDS
T03915
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
pxy
Plutella xylostella (diamondback moth)
Pathway
pxy03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pxy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
105392096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pxy03400
]
105392096
Enzymes [BR:
pxy01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
105392096
DNA repair and recombination proteins [BR:
pxy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
105392096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_IV
DNA_ligase_A_C
RNA_ligase
BRCT
BRCT_2
LIG3_BRCT
Motif
Other DBs
NCBI-GeneID:
105392096
NCBI-ProteinID:
XP_048489181
LinkDB
All DBs
Position
5:3456178..3471746
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AA seq
882 aa
AA seq
DB search
MANEISFEQFCDVLEKIYNKKGNRPEQERILSDFITEIKSNAASNNQDGNLYPVLRLLLP
DLERERSAYNLKEKKLGQLLRKVLGLHPSSNYANKLLNYRGVGKCDGGNDFASVASTVIR
NTLGNKDTKCTLTIRDVNEKLDQISEGDTENNILFTTIVKSTNPTQAKWFFRIVLKELRL
GLGRAAALACLHCDAPEYYDNCSDLAKLCEELDEGSSRPLEQGVRLFTHVCPMSSERLDI
TRIEATLRPDRTYHMEEKFDGERFQIHMKDGQFNYLSRRGFSFADKYGKTYDSGLFTPQL
KDCFKAGVDSFILDGEMMGWHIERERFGAKAMYDVKKLKENSKYRPCFFAFDLLYYNGTS
LVGAPEQGGRPLRERLDLLDNMFTDLSGVIMHSRRKMVVNSSHVLEALNQAIEDEEEGLV
VKDTGSYYIANKRNAGWYKIKPEYTEGATTDLDLVVIGAKYAANKSHGLAKSFFVACVDR
DPGSPPRRWLSVCSVSSGLTLEEKERICKQLSPHWKKASEVPVPECLVFGRERPDLWVMP
EHSTVFTVRATELVLSRDSGTAHTLRFPRVQRLRDDKPRGDVITLADINQLVSNKGAVMK
LSTHKIDQSEIEVGAAKAPRKRKANPLQVAEQFKTISKEVEVTSGALKGRKICVLSDDEE
CSKKDLEEIVLRHAGSVVQNPSPTTWCCVYGTLNFRVRNLIKSQQYDIVHSSWLRTLPPS
DRPCPSPAPLHLVAMCSETRVRLARDYDVYGDSYTEDVDEETLRRCFDKMDSDPPIHLTT
EEMIELDNELFEGTNPYSFLRPCFIHTKDCRSLAAIKAQIFGASLCKIQSPNLTHIVLNE
DEVNNCDLESIKNDTKAFVVSTDWLEECFERREMVAELEYAL
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatgaaatatcgttcgaacagttctgcgatgtcctagaaaaaatatacaacaaa
aaaggaaatagacccgagcaagaaagaatcttatcagattttataaccgaaattaaatct
aacgctgctagcaataatcaggatggcaacctctacccagtgctgcgtctcctactacca
gatctcgagcgcgagagaagcgcttacaacttgaaggagaagaaactaggccaactgctg
aggaaagtcctcggtctacatccgtcttccaactacgccaacaagttgctcaactacagg
ggtgtcgggaagtgcgacgggggcaatgacttcgcgagtgtagcgtccactgtgataagg
aacaccctgggtaataaggatacgaagtgcacactgactattcgggatgttaatgagaag
ttggatcagatatctgagggggacactgagaataatattctattcacaaccatagtgaag
agcacgaaccctacacaagcgaagtggttctttcgcatagtgctgaaggagctccgcttg
ggcctgggccgcgccgccgcgctcgcctgtctgcactgcgacgcgccagagtactatgac
aactgtagtgatctcgccaagctatgcgaagagttagacgagggttcgtcccgccctctc
gagcaaggcgtgcggctgttcacacacgtgtgtccgatgagctcggagcggctcgacatc
acgcgcatagaggccacgctgaggccggaccggacttaccatatggaggagaagtttgat
ggggaacggtttcagatccacatgaaagatggccagtttaactacctatcccgtcgtggt
ttctcgtttgcagacaagtatggcaagacgtatgactccggtctgttcactccccagttg
aaggattgcttcaaggctggggtggacagcttcatactggacggagaaatgatgggatgg
catattgaaagagaacgattcggtgctaaagccatgtacgacgtcaaaaagctgaaagaa
aactccaaataccgtccttgtttcttcgccttcgacttactctactacaatggcacttcc
ctggtgggtgcgccggagcagggcgggaggccgttgagagagcggctggacctgttggac
aacatgttcacggacttatccggagttattatgcacagtcggagaaagatggtggtgaat
agttcacacgtgctagaagctctaaaccaagccatcgaagacgaagaagagggtctagtt
gtgaaagacacgggctcctactacattgctaacaaacggaacgcaggatggtacaaaata
aaacctgagtacacggagggagcgacgacggacctggacctcgtggtgatcggggcgaag
tatgcggccaacaagagtcatgggttggccaagagtttcttcgtggcgtgcgttgatcgc
gacccaggctcgccgccgcgacgctggctatccgtctgcagcgtatcttcaggactgacc
ctcgaggagaaggagcgtatctgcaaacaactctctcctcactggaagaaggctagcgaa
gtcccggtgcccgagtgtctggtgttcggcagagagaggcccgatctgtgggtcatgccc
gaacattctactgtgtttactgtccgcgccaccgagctggtgctcagccgcgactcgggc
acggcgcacacgctgcgcttcccgcgcgtgcagcgattgcgcgacgacaagccgcgcggt
gacgtcatcacgctggccgacatcaaccaactcgtctctaacaaaggagcagtgatgaag
ctgagcacacacaaaatagaccaatcagagatcgaggtgggagccgcgaaagcgcctcgg
aaacgcaaagccaaccctctacaagtcgccgagcaattcaaaactatatccaaagaggtt
gaagtgacttctggagccctgaaagggagaaaaatatgtgttctgtcggatgatgaggaa
tgcagcaagaaggatctggaagaaattgttctgaggcacgcggggagcgttgtacagaat
ccgagcccaacaacgtggtgttgcgtctacggaaccctcaacttccgcgtccgcaacctc
attaaatcccaacagtatgacatagtccactcatcctggctccgaaccctgcccccctcc
gaccgcccctgcccttcccccgccccgctgcatctagtcgccatgtgcagtgagactagg
gtcaggctggctagggattatgacgtctatggggatagctatacagaggatgtggatgag
gagacgttaagacggtgctttgataagatggatagcgatccacccattcacttgaccact
gaagaaatgatagaacttgacaacgaacttttcgaaggaaccaatccgtattcctttcta
agaccatgcttcatacatacgaaagattgtagaagtctagcagctatcaaagctcagatc
tttggggcttctctatgcaaaatccagtcacctaatttaacacatattgttttaaatgaa
gatgaagtgaataattgtgatctagagagtattaagaatgatactaaagcttttgtagta
tcgaccgattggttggaagaatgctttgaaaggagagaaatggtggctgaattagaatat
gcactgtga
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