Plutella xylostella (diamondback moth): 119690362
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Entry
119690362 CDS
T03915
Name
(RefSeq) general transcription factor 3C polypeptide 3
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
pxy
Plutella xylostella (diamondback moth)
Pathway
pxy03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pxy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
119690362
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pxy03400
]
119690362
Enzymes [BR:
pxy01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
119690362
DNA repair and recombination proteins [BR:
pxy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
119690362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_14
TPR_1
TPR_19
TPR_2
TPR_CcmH_CycH
BTAD
Motif
Other DBs
NCBI-GeneID:
119690362
NCBI-ProteinID:
XP_037968846
LinkDB
All DBs
Position
5:3456182..3458767
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AA seq
795 aa
AA seq
DB search
MDSNPGYSGQMDEEELTQKFLRGEITFAEYSNEWYGKDDEDLDDKADDDEPCPIPAQLKE
KFNSKRRSKYTRLSTALLGLMGEANIRFVRGEKEIAEKMCYEIIRQVPNAPEPYQTLAQI
YEGDAEKHLQFSLLAAHLSPSDAHEWQRLAAISKEKNDAKQEMLCYSQAVKAEPQNIDLH
MKRLELLTALENINYPLNTLKVTRVKCYHKIVTSLPPSEGETIMKYAKLAASLYHSGNEI
ERALEVMAAAYKKCSSLFTLEDTNLFLELLIARRQYQTCIEVFVANAEVEIEAEIQTLRD
DNNIVEQTSYLNCRIPTNLPIDLKSKLLVCFIYLKAFNLVRTLLDDFLTNDVEKAGDLYM
DIEEALSAVGNHELAFRVLEPLVKNQSFDLGAVWLKHAECLYQLGREDDAVNSYFNVLKH
APHHADARQKLFNILERKNCIDDALRILNQDYKLTVSAGLLHQQCLILKKYNRTLEYLDV
GVMLLYKTFVKFRRPEEFKFARYSRSPLELIHNYRISRGEKPFNDDIHFDEQETFKLSPQ
EEWELFKELLSIARKYGKYHVMEKLSFGALMSKSLAPHQQEIEFLCFQACLLNQDYSNAL
ILVKDFAQKYANIVCWNMLNLISNLSDDHIQSKYLTRLFNKKPHIIKNLLIGYTYLTSGR
YLMAMKYFLEYNEHRKDALSALTVAVTFLNMVSVRTIDKHHNLVLQAMAYLLKYQQLRKC
DQETFYNLGRAFHMLSLNNLAIEYYEKVLACEPLPACKQHGVMNLTREAAYNLCVLYKDH
SPKVAQSIMLKYLVI
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggacagcaatcctggttattccggccaaatggacgaagaggaactaacccaaaaattc
ttaaggggtgaaataacttttgccgagtattcaaacgaatggtatggtaaagatgacgag
gacttggatgataaagcagatgacgatgaaccatgccccattcctgcacagttaaaagaa
aaattcaacagcaaaaggcgtagtaaatacacgcgactgtcaacagcactgctgggattg
atgggtgaagcaaacataaggtttgtcagaggggaaaaagaaatagctgaaaaaatgtgc
tatgaaattattaggcaggttccaaatgcaccagaaccttaccagacactagctcagata
tatgagggtgatgctgaaaaacacctacaattttcactccttgctgcccacttgagtccg
agtgatgctcatgaatggcagaggcttgctgctatatctaaggaaaaaaatgatgcaaaa
caagaaatgttatgttactcacaagctgtaaaggcagaaccacaaaatattgatttacac
atgaaaagacttgaattgctcactgccttggaaaacattaattacccactaaacacacta
aaagttacaagagtgaaatgttatcacaaaatagtaacttccctgcccccatcagaagga
gaaactattatgaaatatgctaaattagctgcgtctttataccacagtggaaatgaaata
gagagagccctagaagtaatggcagctgcttacaaaaaatgttcatccctttttactctg
gaggacactaacttatttttagagcttttaatagccaggagacagtaccagacatgtata
gaagtatttgtagccaatgctgaagtagagattgaagctgaaatacagactcttcgtgat
gacaacaatattgtagaacaaacaagctacttaaactgcaggataccaactaacttacct
atagatttgaaaagtaaactgttggtatgttttatttatctgaaagccttcaatttagta
cgaactttgctagatgacttcttaactaatgatgtagagaaagccggtgatctgtacatg
gatatagaagaagcattatcagctgttggcaatcatgaacttgcatttagagtgctagag
ccacttgtcaaaaaccaaagctttgacctcggagcagtttggctaaagcatgctgagtgc
ttgtatcagctggggagagaagacgatgctgtcaactcttacttcaatgttttgaagcac
gccccacaccatgctgatgcaagacagaaactattcaatatactggagagaaaaaactgt
attgatgatgccttgaggattttaaatcaggattataaactaactgtctctgctggtcta
ctccaccaacagtgtcttatcctgaaaaaatataacagaacattagagtatttggacgtg
ggggtgatgctgctgtataaaacatttgttaaattccgaagaccagaagaatttaaattt
gcacgctactcaaggtcaccactggaacttattcacaattacagaatttctcgaggggaa
aaaccattcaatgatgatattcactttgatgaacaggaaacattcaaattgtcaccccag
gaagaatgggaattattcaaggaactgcttagtattgctaggaaatatggaaaatatcat
gtcatggaaaagctatcatttggagcacttatgtcaaagtccttagcaccgcaccaacaa
gaaatagagttcctatgttttcaggcatgcttattgaaccaagattacagcaatgcactt
attttggttaaggattttgcacaaaagtatgccaacatagtgtgttggaacatgctgaac
ctcatcagcaacttgtcggatgaccacatccagtccaagtacctcacgcgcttgtttaac
aagaaaccccacattatcaaaaatctattgattggctacacttacctaacatctgggcgt
tatttgatggctatgaaatatttcttggagtacaatgaacaccgtaaagacgcgctctcg
gctctgactgttgctgtcacatttctgaacatggtgtccgtacgaacgatagacaaacac
cacaacttggtactacaagcgatggcgtatctgttaaagtaccaacaactaagaaagtgt
gaccaagagaccttttataatttggggagagccttccacatgctgagcctcaacaatcta
gctattgaatattatgagaaagtattagcttgtgaaccactaccggcgtgcaagcagcat
ggcgtcatgaacctcactcgcgaggcggcctacaatctctgcgtgttgtacaaagaccac
tctcccaaagtggcccaaagtataatgttgaagtacctggttatataa
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