KEGG   PATHWAY: pye02010
Entry
pye02010                    Pathway                                
Name
ABC transporters - Paracoccus yeei
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
Pathway map
pye02010  ABC transporters
pye02010

Other DBs
GO: 0043190 0043191 0043192
TC: 3.A.1
Organism
Paracoccus yeei [GN:pye]
Gene
A6J80_00080  [KO:K16785]
A6J80_00380  [KO:K17324]
A6J80_00385  [KO:K17325]
A6J80_00390  [KO:K17322]
A6J80_00395  [KO:K17323]
A6J80_00405  [KO:K17321]
A6J80_00435  [KO:K01999]
A6J80_00440  [KO:K01995]
A6J80_00445  [KO:K01996]
A6J80_00450  [KO:K01997]
A6J80_00455  [KO:K01998]
A6J80_00475  [KO:K15555] [EC:7.6.2.14]
A6J80_00480  [KO:K15554]
A6J80_00485  [KO:K15553]
A6J80_00750  [KO:K23509]
A6J80_00755  [KO:K23509]
A6J80_00760  [KO:K10820] [EC:7.5.2.9]
A6J80_00765  [KO:K23508]
A6J80_00795  [KO:K18893]
A6J80_00800  [KO:K09688]
A6J80_00805  [KO:K10107]
A6J80_00810  [KO:K09689] [EC:7.6.2.12]
A6J80_00925  [KO:K10439]
A6J80_00930  [KO:K10441] [EC:7.5.2.7]
A6J80_00935  [KO:K10440]
A6J80_00940  [KO:K10440]
A6J80_00960  [KO:K02044]
A6J80_00965  [KO:K02041] [EC:7.3.2.2]
A6J80_01020  [KO:K15552]
A6J80_01025  [KO:K10831] [EC:7.6.2.7]
A6J80_01030  tauA; taurine ABC transporter substrate-binding protein [KO:K15551]
A6J80_01100  [KO:K10439]
A6J80_01105  [KO:K10440]
A6J80_01110  [KO:K10441] [EC:7.5.2.7]
A6J80_01190  [KO:K03523]
A6J80_01210  [KO:K10441] [EC:7.5.2.7]
A6J80_01215  [KO:K10440]
A6J80_01220  [KO:K10439]
A6J80_01260  [KO:K23227]
A6J80_01265  [KO:K23228]
A6J80_01270  [KO:K10829] [EC:7.2.2.16]
A6J80_01345  [KO:K09688]
A6J80_01350  [KO:K09689] [EC:7.6.2.12]
A6J80_01355  [KO:K10107]
A6J80_01570  [KO:K01999]
A6J80_01995  [KO:K10441] [EC:7.5.2.7]
A6J80_02000  [KO:K10440]
A6J80_02005  [KO:K10439]
A6J80_02375  [KO:K17213]
A6J80_02380  [KO:K17214]
A6J80_02385  [KO:K17215]
A6J80_02390  [KO:K17213]
A6J80_02420  [KO:K25286]
A6J80_02425  [KO:K23186]
A6J80_02430  [KO:K23187]
A6J80_02435  [KO:K23188]
A6J80_02455  [KO:K13896]
A6J80_02460  [KO:K13895]
A6J80_02465  [KO:K13894]
A6J80_02470  [KO:K13893]
A6J80_02705  [KO:K23537]
A6J80_02710  [KO:K23535]
A6J80_02715  [KO:K23536]
A6J80_02720  [KO:K07335]
A6J80_02810  [KO:K03523]
A6J80_03720  [KO:K11604]
A6J80_03725  [KO:K11607]
A6J80_03730  [KO:K11605]
A6J80_03735  [KO:K11606]
A6J80_03930  [KO:K12372]
A6J80_03935  [KO:K12371]
A6J80_03940  [KO:K12370]
A6J80_03945  [KO:K12369]
A6J80_03950  [KO:K12368]
A6J80_04285  [KO:K05685] [EC:7.6.2.-]
A6J80_04640  [KO:K11069]
A6J80_05170  [KO:K09816]
A6J80_05175  znuC; metal ABC transporter ATP-binding protein [KO:K09817] [EC:7.2.2.20]
A6J80_05185  [KO:K09815]
A6J80_05215  [KO:K05685] [EC:7.6.2.-]
A6J80_06285  [KO:K02045] [EC:7.3.2.3]
A6J80_06290  cysW; sulfate ABC transporter permease subunit CysW [KO:K02047]
A6J80_06295  cysT; sulfate ABC transporter permease subunit CysT [KO:K02046]
A6J80_06300  [KO:K23163]
A6J80_06395  [KO:K02002]
A6J80_06400  choW; choline ABC transporter permease subunit [KO:K02001]
A6J80_06405  choV; choline ABC transporter ATP-binding protein [KO:K02000] [EC:7.6.2.9]
A6J80_06990  [KO:K01995]
A6J80_06995  [KO:K01997]
A6J80_07005  [KO:K01999]
A6J80_07010  [KO:K01999]
A6J80_07015  [KO:K01996]
A6J80_07210  [KO:K09812]
A6J80_07215  [KO:K09811]
A6J80_07330  [KO:K07323]
A6J80_07340  [KO:K12536]
A6J80_07850  [KO:K09972] [EC:7.4.2.1]
A6J80_07855  [KO:K09971]
A6J80_07860  [KO:K09970]
A6J80_07865  [KO:K09969]
A6J80_09175  [KO:K10440]
A6J80_09180  [KO:K10441] [EC:7.5.2.7]
A6J80_09185  [KO:K10439]
A6J80_09270  [KO:K02002]
A6J80_09275  [KO:K02001]
A6J80_09280  [KO:K02000] [EC:7.6.2.9]
A6J80_09315  modA; molybdate ABC transporter substrate-binding protein [KO:K02020]
A6J80_09320  [KO:K02018]
A6J80_09920  [KO:K15599]
A6J80_09935  [KO:K15598]
A6J80_09990  [KO:K15553]
A6J80_09995  [KO:K15554]
A6J80_10000  [KO:K15555] [EC:7.6.2.14]
A6J80_10055  [KO:K10112] [EC:7.5.2.-]
A6J80_10175  [KO:K10547]
A6J80_10180  [KO:K10548] [EC:7.5.2.-]
A6J80_10185  [KO:K10546]
A6J80_10965  [KO:K23537]
A6J80_10970  [KO:K23535]
A6J80_10975  [KO:K23536]
A6J80_10980  [KO:K07335]
A6J80_11330  [KO:K05845]
A6J80_11335  [KO:K05846]
A6J80_11340  [KO:K05847] [EC:7.6.2.9]
A6J80_11345  [KO:K05846]
A6J80_11410  [KO:K16783]
A6J80_11415  [KO:K16784] [EC:7.6.2.-]
A6J80_11425  [KO:K05816] [EC:7.6.2.10]
A6J80_11430  [KO:K05815]
A6J80_11435  [KO:K05814]
A6J80_11440  [KO:K05813]
A6J80_11500  lptB; LPS export ABC transporter ATP-binding protein [KO:K06861] [EC:7.5.2.5]
A6J80_11860  [KO:K02067]
A6J80_11865  [KO:K02065]
A6J80_11870  [KO:K02066]
A6J80_12010  [KO:K09815]
A6J80_12125  [KO:K02002]
A6J80_12220  urtA; urea ABC transporter substrate-binding protein [KO:K11959]
A6J80_12225  urtB; urea ABC transporter permease subunit UrtB [KO:K11960]
A6J80_12230  urtC; urea ABC transporter permease subunit UrtC [KO:K11961]
A6J80_12235  urtD; urea ABC transporter ATP-binding protein UrtD [KO:K11962]
A6J80_12240  urtE; urea ABC transporter ATP-binding subunit UrtE [KO:K11963]
A6J80_13085  [KO:K23536]
A6J80_13090  [KO:K23535]
A6J80_13095  [KO:K23537]
A6J80_13100  [KO:K07335]
A6J80_14425  [KO:K02002]
A6J80_14430  [KO:K02000] [EC:7.6.2.9]
A6J80_14435  [KO:K02001]
A6J80_14440  [KO:K02001]
A6J80_14490  [KO:K02073]
A6J80_14495  [KO:K02073]
A6J80_14500  [KO:K02071]
A6J80_14505  [KO:K02072]
A6J80_14675  [KO:K02040]
A6J80_14680  pstC; phosphate ABC transporter permease subunit PstC [KO:K02037]
A6J80_14685  pstA; phosphate ABC transporter permease PtsA [KO:K02038]
A6J80_14690  [KO:K02036] [EC:7.3.2.1]
A6J80_14785  [KO:K02073]
A6J80_14790  [KO:K02072]
A6J80_14795  [KO:K02071]
A6J80_14975  [KO:K02012]
A6J80_16285  [KO:K10112] [EC:7.5.2.-]
A6J80_16395  tauA; taurine ABC transporter substrate-binding protein [KO:K15551]
A6J80_16400  [KO:K10831] [EC:7.6.2.7]
A6J80_16405  [KO:K15552]
A6J80_16505  [KO:K10025] [EC:7.4.2.1]
A6J80_16510  [KO:K10022]
A6J80_16515  [KO:K10024]
A6J80_16520  [KO:K10023]
A6J80_17045  [KO:K02011]
A6J80_17050  [KO:K02012]
A6J80_17055  [KO:K02010] [EC:7.2.2.7]
A6J80_17615  ccmA; heme ABC exporter ATP-binding protein CcmA [KO:K02193] [EC:7.6.2.5]
A6J80_17620  ccmB; heme exporter protein CcmB [KO:K02194]
A6J80_17625  [KO:K02195]
A6J80_17740  [KO:K02066]
A6J80_17745  [KO:K02065]
A6J80_18065  [KO:K11071]
A6J80_18070  [KO:K11070]
A6J80_18075  [KO:K11072] [EC:7.6.2.11]
A6J80_18190  lptG; LPS export ABC transporter permease LptG [KO:K11720]
A6J80_18195  lptF; LPS export ABC transporter permease LptF [KO:K07091]
A6J80_18470  [KO:K10107]
A6J80_18475  [KO:K09689] [EC:7.6.2.12]
A6J80_18985  [KO:K01999]
A6J80_18990  [KO:K01995]
A6J80_18995  [KO:K01996]
A6J80_19000  [KO:K01997]
A6J80_19005  [KO:K01998]
A6J80_19190  mlaD; outer membrane lipid asymmetry maintenance protein MlaD [KO:K02067]
A6J80_19285  [KO:K09810] [EC:7.6.2.-]
A6J80_19290  [KO:K09808]
A6J80_19350  [KO:K10440]
A6J80_19355  [KO:K10441] [EC:7.5.2.7]
A6J80_19360  [KO:K10439]
A6J80_19390  [KO:K02002]
A6J80_19410  [KO:K02002]
A6J80_19415  [KO:K02001]
A6J80_19420  [KO:K02000] [EC:7.6.2.9]
A6J80_19875  [KO:K19341]
A6J80_19880  [KO:K19340]
A6J80_20085  [KO:K15580]
A6J80_20285  [KO:K02045] [EC:7.3.2.3]
A6J80_20290  [KO:K02048]
A6J80_20295  cysT; sulfate ABC transporter permease subunit CysT [KO:K02046]
A6J80_20300  cysW; sulfate ABC transporter permease subunit CysW [KO:K02047]
A6J80_20615  [KO:K01999]
A6J80_20620  [KO:K01997]
A6J80_20625  [KO:K01995 K01998]
A6J80_20630  [KO:K01996]
A6J80_20695  [KO:K02012]
A6J80_20700  [KO:K02011]
A6J80_20705  [KO:K02010] [EC:7.2.2.7]
A6J80_20790  glnQ; amino acid ABC transporter ATP-binding protein [KO:K09972] [EC:7.4.2.1]
A6J80_20795  [KO:K09971]
A6J80_20800  [KO:K09970]
A6J80_20805  [KO:K09969]
A6J80_20940  [KO:K01999]
A6J80_20945  [KO:K01997]
A6J80_20950  [KO:K01998]
A6J80_20955  [KO:K01995]
A6J80_20960  [KO:K01996]
A6J80_21450  [KO:K10439]
A6J80_21455  [KO:K10440]
A6J80_21460  [KO:K10440]
A6J80_21465  [KO:K10441] [EC:7.5.2.7]
A6J80_21475  [KO:K10439]
A6J80_22160  [KO:K17213]
A6J80_22220  [KO:K10561]
A6J80_22225  [KO:K10560]
A6J80_22235  rhaS; rhamnose ABC transporter substrate-binding protein [KO:K10559]
A6J80_22285  [KO:K10112] [EC:7.5.2.-]
A6J80_22340  [KO:K02002]
A6J80_22515  [KO:K12536]
A6J80_22830  [KO:K19341]
A6J80_22835  [KO:K19340]
A6J80_23115  [KO:K02002]
A6J80_23120  [KO:K02000] [EC:7.6.2.9]
A6J80_23125  [KO:K02001]
Compound
C00009  Orthophosphate
C00025  L-Glutamate
C00031  D-Glucose
C00032  Heme
C00034  Manganese
C00037  Glycine
C00038  Zinc cation
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00051  Glutathione
C00059  Sulfate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00070  Copper
C00077  L-Ornithine
C00079  L-Phenylalanine
C00086  Urea
C00088  Nitrite
C00089  Sucrose
C00093  sn-Glycerol 3-phosphate
C00095  D-Fructose
C00098  Oligopeptide
C00107  Dipeptide
C00114  Choline
C00116  Glycerol
C00120  Biotin
C00121  D-Ribose
C00123  L-Leucine
C00134  Putrescine
C00135  L-Histidine
C00137  myo-Inositol
C00140  N-Acetyl-D-glucosamine
C00148  L-Proline
C00151  L-Amino acid
C00159  D-Mannose
C00175  Cobalt ion
C00181  D-Xylose
C00183  L-Valine
C00185  Cellobiose
C00188  L-Threonine
C00208  Maltose
C00212  Adenosine
C00243  Lactose
C00244  Nitrate
C00245  Taurine
C00255  Riboflavin
C00259  L-Arabinose
C00288  HCO3-
C00291  Nickel
C00294  Inosine
C00299  Uridine
C00315  Spermidine
C00320  Thiosulfate
C00330  Deoxyguanosine
C00333  D-Galacturonate
C00338  Lipopolysaccharide
C00378  Thiamine
C00379  Xylitol
C00387  Guanosine
C00392  Mannitol
C00407  L-Isoleucine
C00430  5-Aminolevulinate
C00470  Pectate
C00475  Cytidine
C00487  Carnitine
C00491  L-Cystine
C00492  Raffinose
C00503  Erythritol
C00526  Deoxyuridine
C00559  Deoxyadenosine
C00719  Betaine
C00794  D-Sorbitol
C00855  D-Methionine
C00865  Phospholipid
C00881  Deoxycytidine
C00919  Choline sulfate
C00973  Cyclomaltodextrin
C01083  alpha,alpha-Trehalose
C01153  Orthophosphoric monoester
C01157  Hydroxyproline
C01177  Inositol 1-phosphate
C01181  4-Trimethylammoniobutanoate
C01279  4-Amino-5-hydroxymethyl-2-methylpyrimidine
C01330  Sodium cation
C01417  Cyanate
C01487  D-Allose
C01606  Phthalate
C01630  Xylobiose
C01667  Bacitracin
C01674  Chitobiose
C01682  Nopaline
C01684  D-Rhamnose
C01762  Xanthosine
C01834  Lipoprotein
C01835  Maltotriose
C01935  Maltodextrin
C01946  Oleandomycin
C02160  Isomaltotriose
C02273  Digalacturonate
C03557  2-Aminoethylphosphonate
C03611  Galactose oligosaccharide
C03619  Methyl beta-D-galactoside
C04114  (E)-4-(Trimethylammonio)but-2-enoate
C04137  Octopine
C05349  Ciprofloxacin
C05402  Melibiose
C05512  Deoxyinosine
C05776  Vitamin B12
C06227  Fe(III)hydroxamate
C06229  Fe(III)dicitrate
C06230  Fe-enterobactin
C06232  Molybdate
C06687  Norfloxacin
C06705  Capsular polysaccharide
C06706  Lipo-oligosaccharide
C06707  Teichoic acid
C06767  Hemine
C07662  Sparfloxacin
C07663  Moxifloxacin
C11612  Polymyxin B
C13768  Colistin sulfate
C14818  Fe2+
C14819  Fe3+
C15521  Alkanesulfonate
C15719  Coelichelin
C16421  AI-2
C16692  Mannopine
C19609  Nickel(2+)
C19872  N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570  alpha-1,5-L-Arabinobiose
C20571  alpha-1,5-L-Arabinotriose
C20572  alpha-1,5-L-Arabinotetraose
C20573  Aldotetraouronic acid
C20679  Tungstate
C21066  D-Galactofuranose
C22040  S-Methyl-L-cysteine
G00457  Maltotetraose
Reference
PMID:9799792
  Authors
Tomii K, Kanehisa M.
  Title
A comparative analysis of ABC transporters in complete microbial genomes.
  Journal
Genome Res 8:1048-59 (1998)
DOI:10.1101/gr.8.10.1048
Reference
  Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
  Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
J Bacteriol 190:4460-9 (2008)
DOI:10.1128/JB.00270-08
Reference
  Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
  Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
Proc Natl Acad Sci U S A 105:5537-42 (2008)
DOI:10.1073/pnas.0801196105
Reference
  Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
  Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
  Journal
Proc Natl Acad Sci U S A 96:13571-6 (1999)
DOI:10.1073/pnas.96.23.13571
Reference
  Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
  Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
  Journal
Genome Res 11:2034-40 (2001)
DOI:10.1101/gr.196301
Reference
  Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
  Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
  Journal
Mol Microbiol 57:1582-92 (2005)
DOI:10.1111/j.1365-2958.2005.04791.x
Reference
  Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
  Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
  Journal
Mol Microbiol 43:703-15 (2002)
DOI:10.1046/j.1365-2958.2002.02778.x
Reference
  Authors
Richard-Fogal CL, Frawley ER, Kranz RG
  Title
Topology and function of CcmD in cytochrome c maturation.
  Journal
J Bacteriol 190:3489-93 (2008)
DOI:10.1128/JB.00146-08
Reference
  Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
  Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
  Journal
J Bacteriol 187:5861-7 (2005)
DOI:10.1128/JB.187.17.5861-5867.2005
Reference
  Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
  Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
  Journal
J Bacteriol 189:8361-5 (2007)
DOI:10.1128/JB.01028-07
Reference
  Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
  Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
  Journal
Mol Microbiol 63:895-910 (2007)
DOI:10.1111/j.1365-2958.2006.05549.x
Reference
  Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
  Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
  Journal
J Bacteriol 190:7693-8 (2008)
DOI:10.1128/JB.00853-08
KO pathway
ko02010   

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