Phormidium yuhuli: NEA10_19170
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Entry
NEA10_19170 CDS
T08410
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
pyh
Phormidium yuhuli
Pathway
pyh01501
beta-Lactam resistance
pyh01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pyh00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NEA10_19170
01503 Cationic antimicrobial peptide (CAMP) resistance
NEA10_19170
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pyh02000
]
NEA10_19170
01504 Antimicrobial resistance genes [BR:
pyh01504
]
NEA10_19170
Transporters [BR:
pyh02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
NEA10_19170
Antimicrobial resistance genes [BR:
pyh01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NEA10_19170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Myelin_PLP
Motif
Other DBs
NCBI-ProteinID:
USR90917
LinkDB
All DBs
Position
complement(4444584..4447679)
Genome browser
AA seq
1031 aa
AA seq
DB search
MFYQFFIKRPVFASVCSLLLMLVGLVGYGSLPVQELPSIDPPVVSVNTTYPGANPRVVET
EVTEILEAELNGVEGVRTLTSTSREGVSSITVQFELDQDIDVGAQEVQRSISQVLGRLPD
DVDAPVIRRESGDATPIIWFSVYGDNEGISTLELSDYADRVLVNALESVNGVSSIFVGGE
RRYAMRLWIDPQRLSARNLTILDVENVLRQENIELPSGRIEGQRSEFSVRTLGRLQEPEE
YEALVLRTTSDGTQIRFSDVGYAEIGAEDDRSFVRFNGRPAVGLGVVKLATANTLEVAAD
ARAEMERLRADFPPGMDYEVAVDNSEFVQLAIDEVWGSLYLACLLVVLVIFFFLRDWRAT
IIPAVTIPVSLISAFGVMFILDFSINTLTLFALTLATGLVVDDTIVVLENIVRYIEQEEM
KPYHAAIKGLQEVIFAVIATTVVLVAVFLPVGFATGVTGQLFAEFALTLAGSVIVSSFVA
LTLAPTLSARVLKSHSMLHGWIFDKVEDFLNGAANFYASSLRLALSFKTVVVVAFALSLG
LLGILFTQIPQGFLPDEDRGQILTIVNAPQGVTINYTDEVMQQIEAIYEEIPEVRYYFTI
GAFGGGGPGQVNQGIAFVRLQPWDERSQPQQSQQALVGQLFGRFSQISDALIFPVNPPAL
PGAGLGQPVQMVLQGASLEQLAEISGDFAQRANALPELMNVDTTLKITQPEVTVAIDRQK
AAALGINARDIANTLQILLGGQQITSFNRENRRYEVVVQAEERFRLSPERLQELSLRTSE
GELVPLSNLVRLETSTTPPQIEHYQRFRSATVEGSPAPGYSLGEAIEALQTLADEIVPSE
ITTQLAGESLEFEEAGEATAFIFGLAMAFIFLVLSAQFESYLDPIVVLLAVPLSLIGALG
SLLLVGLELNVYSQIGLIMLIGLATKNSILIVEFANQKREEGLSIYRAVVEAGRIRFRPI
LMTAFSTIFGLMPLALATGAGAASRVSIGVSVVGGMFLSTILSLYVVPVFYLIINGVQTR
LVRTLHLEPEH
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgttttaccagtttttcattaagcgccccgtcttcgcctccgtctgttccctgttgcta
atgctggtgggactggtggggtacgggagcctaccggtccaggaactccccagcattgac
cctccagtggtgagcgtcaacacgacctatcccggtgccaaccccagggttgtggaaacc
gaggtgaccgaaatcctcgaagccgaactcaacggcgttgaaggagtccgcaccctcacc
tccaccagtcgagaaggtgtcagttccatcaccgtccagtttgaactcgaccaagatatt
gatgtcggcgcccaagaagtccagcgcagcatctcccaagttttagggcgactccccgac
gacgtcgacgctcccgtcattcgtcgtgaatccggagatgccacacccatcatttggttt
agcgtttacggggataatgagggcatcagcaccctagaactgagtgactacgccgatcgc
gtccttgtgaatgccctcgaaagcgtcaatggggtcagtagcatcttcgtcgggggagag
cggcgctatgccatgcgactgtggatcgacccccaacgactcagcgcccggaacctcacc
atcctagacgtggaaaatgtgctacgtcaggaaaacatcgaacttcccagcggtcggatt
gaaggacaacgcagcgaattttccgtgcgtacccttggacgactccaagaacccgaagaa
tacgaagccctagtcctacgcaccaccagcgatggaacccaaattcgcttctcagatgtg
ggttatgccgagattggggccgaagatgatcgctccttcgtgcgttttaacggtcgtccg
gctgtgggtttaggggtcgtcaaactggccaccgccaacaccctagaggtggccgccgat
gctcgcgccgaaatggaacgactgcgggccgactttccaccggggatggactatgaagtc
gccgtggataactcagaatttgtgcaactggcgatcgacgaagtctgggggtccctctat
ctcgcctgtttactggtggtactggtcatcttcttcttcctacgggattggcgggcgact
attatccccgccgtgaccattcccgtctccctgatttccgccttcggggtcatgtttatc
ttggacttctccatcaataccctgaccctgtttgccctcaccctggccaccggcttagtt
gtggacgataccatcgttgtcttagaaaacatcgtccgctacatcgaacaggaagagatg
aaaccctatcatgccgccatcaaggggttacaagaggtgatttttgccgtgattgccacc
accgtcgttttggtggcggtgttccttcctgtggggtttgccaccggcgtcaccggacaa
ctctttgccgaattcgccctcaccctggccggctccgtgattgtctcctccttcgtcgcc
ctaaccctggccccaaccctctccgcccgagtcttaaaatctcactccatgctccatggt
tggatttttgacaaagtggaagacttcttgaatggagcggccaacttttacgcctctagt
ttgcgtctggccctgtcctttaaaaccgtggttgtggtggctttcgccctgtctctgggc
ttactggggattttatttacccaaattcctcaaggctttctccccgatgaagatcgcggt
caaattctcaccattgtcaatgcgcctcagggggtcaccattaactataccgatgaggtg
atgcagcaaatcgaagccatttatgaggaaattcctgaagtccgctattacttcaccatt
ggtgcttttgggggaggcggcccgggacaagtgaatcaggggattgcctttgtacggctc
caaccttgggacgaacggagtcaaccgcagcagtctcaacaagctcttgtgggtcagctc
tttgggcgcttctcccagatttctgatgccttaattttcccagtgaatccaccggcgtta
ccgggagcgggtttagggcaaccggtccaaatggtcttacagggggcgagtttggagcag
ttggcagagatttccggggactttgcccagcgggccaatgcacttcctgaattgatgaat
gtggataccaccctgaaaatcactcaacctgaggtgaccgtggccattgaccgtcagaag
gcggcggccttggggattaatgcccgtgatattgccaacaccctgcaaattctcttgggg
ggacaacaaatcaccagtttcaaccgagaaaatcgtcgctatgaagtggtggtacaggct
gaggaacgcttccgccttagtcctgagcgccttcaggaactctccttacgcaccagtgag
ggagagttagtgcctttatcgaacttagtgcgtttagaaaccagtaccactccgccccag
attgaacattatcaacggttccgctccgctacggttgaggggtctccggcaccggggtat
agtctcggcgaggcgattgaggctctacaaactctagcggatgagatagttccctcagaa
atcaccactcagttggctggggagtcgttggagttcgaggaagccggggaagccacagcg
tttatctttggcttagccatggcctttattttcctagtgctatcggctcagttcgagagt
tatttagatccgattgtggtcttgttggcggttccactgtctttgattggggctttaggt
tccctcttattggttggattagagttgaatgtgtatagccagattggcttgattatgctc
atcggcttggcaaccaaaaactcaattttgattgtggagtttgcgaatcaaaaacgggaa
gaaggactttcaatttatcgagcggttgttgaagctggtcgcattcgctttcgacccatt
ttaatgacagctttctccacgattttcggcttgatgcctctggctcttgctacgggtgct
ggggcagctagtcgagtttcgattggggtttcggtggtgggtggaatgtttctatccaca
attttgagtctttatgtggttcctgtgttttatctgattatcaatggcgtacaaactcgc
ttagtgcgaactctgcacttagaaccggaacattaa
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