Pseudomonas yamanorum: AK972_0787
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Entry
AK972_0787 CDS
T05821
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pym
Pseudomonas yamanorum
Pathway
pym00300
Lysine biosynthesis
pym00550
Peptidoglycan biosynthesis
pym01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pym00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AK972_0787
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AK972_0787
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pym01011
]
AK972_0787
Enzymes [BR:
pym01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
AK972_0787
Peptidoglycan biosynthesis and degradation proteins [BR:
pym01011
]
Precursor biosynthesis
Amino acid ligase
AK972_0787
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AMW81587
UniProt:
A0A143GBI0
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All DBs
Position
833424..834887
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AA seq
487 aa
AA seq
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MSLSLNKIFAHAGRDLLIRELTLDSRNVRAGDLFLAVPGGKFDGRDHIADALKRGAAAVA
YEVEGATVLPITDVPLIPVKGLAAQLSDIAGRFYGDPSRTLNLVGVTGTNGKTSVTQLVA
QALDLLGQHCGIVGTLGTGFYGALQSGLHTTPNPIAVQATLADLKKAGAKAVAMEVSSHG
LDQGRVTALAFDVAVMTNLSRDHLDYHGTMEAYAATKARLFAWNDLKCRVVNLDDEFGRQ
LAAAQGDGRLISYSLEDSSAYLYCREASFDDEGVRATLVTPQGEHHLRSTLLGRFNLSNV
LAAVGALLGLDYALDEILRVLPKLEGPAGRMQRLGGGTQPLVVVDYAHTPDALEKILQAL
RPHAKGKLLCLFGCGGDRDRGKRPLMAEIVERLADGVLVTDDNPRSEDPSQIFDDIRVGF
QEASKATFVAGRGAAIAQLIASASADDVVVLAGKGHEDYQEINGERHPFSDLVEADHALT
AWEVAHA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtcccttagcctgaacaagatttttgcccacgctggccgcgatctgctgattcgcgag
ttgaccctggacagccgtaatgtgcgcgccggtgacctgttcctggccgtgccgggtggc
aagttcgatggccgtgaccatatcgccgacgcgctgaaacgcggtgcggcagcggtggcc
tatgaagtggaaggcgccactgtgctgccgatcaccgacgtgccattgattccggtcaag
ggcctggcggcgcagctgtcggacatcgccgggcgcttttatggcgacccgagccgtacc
ctgaacctggtgggcgtgaccggcaccaacggcaagaccagcgtgacccaattggttgcc
caggcgcttgacctgctgggccaacattgcggcatcgtcggcaccctgggcaccggtttc
tacggcgcgctgcaaagcggcctgcacaccacgcctaacccaattgccgtgcaggcgacc
ctggccgacctgaaaaaggccggtgccaaggcagttgccatggaagtctcgtcccacggg
ctggaccaggggcgcgtcactgccctggcgttcgacgtggcggtgatgaccaacctgtcc
cgggatcacctggattatcacgggaccatggaggcctatgccgccaccaaggcccggctg
tttgcctggaatgacctgaagtgccgggtggtcaacctggacgacgaattcggtcgtcag
ctggccgccgcccaaggcgacggtcgcctgatcagctacagcctggaagattccagcgcc
tacctgtattgccgtgaagccagctttgatgacgaaggcgtgcgcgccaccctggtgacg
ccgcagggcgagcaccatttgcgcagcaccttgctcgggcgtttcaacctgagcaacgta
ttggctgctgttggtgccttgctcggcctggattacgccctcgacgaaatcctgcgcgtg
ctgccgaagctggaaggcccggccggtcgtatgcagcgcctcggcggaggcacccagccg
ctggtggtggtcgattacgcccacaccccagacgccctggaaaaaatcctgcaagccctg
cgtccccacgccaagggcaagttactgtgcctgttcggctgtggcggtgaccgcgatcgc
ggcaaacgcccgctgatggctgaaatcgtcgagcgcctggctgatggtgtcctggtcact
gacgacaacccgcgcagcgaagacccaagccagattttcgatgacattcgtgtcggcttt
caagaggcgtccaaggcgacgttcgttgccggtcgcggtgcagccatcgctcaattgatc
gccagcgcaagtgctgacgacgtggtggtgctggccggtaaaggtcacgaggactatcag
gaaatcaacggcgaacgccatcctttctcggatctggtcgaggctgatcacgccttgacc
gcatgggaggtggcccatgcttaa
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