KEGG   Pseudomonas yamanorum: AK972_2408
Entry
AK972_2408        CDS       T05821                                 
Name
(GenBank) NAD-specific glutamate dehydrogenase, large form
  KO
K15371  glutamate dehydrogenase [EC:1.4.1.2]
Organism
pym  Pseudomonas yamanorum
Pathway
pym00220  Arginine biosynthesis
pym00250  Alanine, aspartate and glutamate metabolism
pym00430  Taurine and hypotaurine metabolism
pym00910  Nitrogen metabolism
pym01100  Metabolic pathways
pym01120  Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:pym00001]
 09100 Metabolism
  09102 Energy metabolism
   00910 Nitrogen metabolism
    AK972_2408
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    AK972_2408
   00220 Arginine biosynthesis
    AK972_2408
  09106 Metabolism of other amino acids
   00430 Taurine and hypotaurine metabolism
    AK972_2408
Enzymes [BR:pym01000]
 1. Oxidoreductases
  1.4  Acting on the CH-NH2 group of donors
   1.4.1  With NAD+ or NADP+ as acceptor
    1.4.1.2  glutamate dehydrogenase
     AK972_2408
SSDB
Motif
Pfam: Bac_GDH_CD GDH_C GDH_ACT1 GDH_ACT2 GDH_HM3 GDH_ACT3 GDH_HM1 GDH_HM2 ELFV_dehydrog
Other DBs
NCBI-ProteinID: AMW83208
LinkDB
Position
2687837..2692696
AA seq 1619 aa
MAFFTAASKADFQHQLQAALAQHISEQALPQVALFAEQFFGIISLDELTQRRLSDLAGCT
LSAWRLLERFDHNQPQVRVYNPDYERHGWQSTHTAVEVLHHDLPFLVDSVRTELNRRGYS
IHTLQTTVLSVRRGKKGELLEILPKGTQGEDVQQESLMYLEIDRCANAAELSVLSKELEQ
VLGEVRVAVADFEPMKAKVQELLAGIDASSYVIDGEEKAEIKSFLEWLVGNHFTFLGYEE
FVVRDEADGGHIEYDTHSFLGLTKLLRPGLTADDLRIEDYAVNYLREPAVLSFAKAAHPS
RVHRPAYPDYVSIRQIDADGKVVKECRFMGLYTSSVYGESVRVIPYIRRKVAEIERRSGF
QAKAHLGKELAQVVEVLPRDDLFQTPVDELFSTVMSIVQIQERNKIRVFLRKDPYGRFCY
CLAYVPRDIYSTEVRQKIQQVLMDRLKASDCEFWTFFSESVLARVQLILRVDPKNRLDID
PLQLEKEVVQACRSWQDDYSSLVVESFGEAHGTNVLADFPKGFPAGYRERFAAHSAVVDM
QHLLSLTEANPLVMSFYQPLGQVSGQRELHCKLYHADTPLALSDVLPILENLGLRVLGEF
PYRLRHANGREFWIHDFAFTAAEGLNLDIQQLNDTLQDAFVHIVNGDAENDAFNRLVLTA
GLPWRDVALLRAYARYLKQIRLGFDLGYIASTLNNHTDIARELTRLFKTRFYLARKLTAE
DLEDKQQRLEQAILTALDDVQVLNEDRILRRYLDLIKATLRTNFYQADANGQNKSYFSFK
FNPHAIPELPKPVPKFEIFVYSPRVEGVHLRFGNVARGGLRWSDREEDFRTEVLGLVKAQ
QVKNSVIVPVGAKGGFLPRRLPLGGSRDEIAAEGIACYRIFISGLLDITDNLKDGVLVPP
LNVVRHDNDDPYLVVAADKGTATFSDIANGIAIDYGFWLGDAFASGGSAGYDHKKMGITA
KGAWVGVQRHFRERGINVQQDSITVVGVGDMAGDVFGNGLLMSDKLQLVAAFNHLHIFID
PNPTPANSFAERQRLFDLPRSAWTDYDTSIMSEGGGIFSRSAKSIAISPQMKERFDIQAD
KLTPTELLNALLKAPVDLLWNGGIGTYVKASTESHADVGDKANDALRVNGNELRCKVVGE
GGNLGMTQLGRVEFGLNGGGSNTDFIDNAGGVDCSDHEVNIKILLNEVVQAGDMTDKQRN
QLLASMTDEVGSLVLGNNYKQTQALSLAARKAFERAAEYKRLMSDLESRGKLDRAIEYLP
SEDQLTERAATGKGLTRPELSVLISYSKIDLKEALLKSLVPDDDYLTRDMETAFPPSLVA
KFSEAMRRHRLKREIVSTQIANDLVNHMGITFVQRLKESTGMSPANVAGAYVIVRDIFHL
PHWFRQIEALDHQVSAEVQLALMDELMRLGRRATRWFLRSRRNEQDAARDVAHFGPHLAA
LGLKLDELLEGPTREGWQNRYQAYVEAGVPELLARMVAGTTHLYTLLPIIEAADVTGQSA
ADVAKAYFAVGSALDLPWYLQQISDLPVGNNWQAQAREAFRDDVDWQQRAITIKVLQMAD
APEDMEARVALWLEQNASMVERWRAMMVEIRAAVGTDYAMYAVANRELLDLAMSGQSVL
NT seq 4860 nt   +upstreamnt  +downstreamnt
atggcgttcttcaccgcagccagcaaagccgacttccagcaccaactgcaagcggcactg
gcgcagcacatcagtgaacaggcactgccacaagtggcgctgttcgctgaacaatttttc
ggcattatttccctggatgaactgacccagcgtcgcttgtccgacctggccggttgcact
ctgtctgcctggcgcctgcttgagcgctttgatcacaaccaaccgcaagtgcgggtctac
aaccccgattacgaacgtcatggctggcaatcgacccacaccgcggtcgaagtgctgcac
cacgacctgccattcctggtggactcggtacgtaccgagctgaaccgccgtggctacagc
atccataccctgcaaaccaccgtgctcagcgtgcgtcgtggcaagaagggcgagttgctg
gaaatcctgccgaaaggcacccagggcgaagacgttcagcaagaatcgctgatgtacctg
gaaatcgaccgttgcgccaacgccgccgagctgagtgtcctgagcaaggagcttgagcag
gtactgggcgaagtgcgcgttgcagtcgccgatttcgaaccgatgaaagccaaggtccag
gagctgctggccggtatcgacgccagctcttatgtgatcgacggcgaagagaaagccgag
atcaagagcttcctggagtggttagtaggcaaccacttcactttcctcggctatgaagag
tttgtggtacgtgacgaggcggatggcggtcatatcgaatatgacacccactcgttcctc
ggtctgaccaagctgctgcgcccgggcctgacggccgatgacctgcgcatcgaagactac
gcagtgaactacttgcgtgagccggctgtgctgtcgttcgccaaggctgctcacccaagc
cgcgtacaccgtccggcctacccggactacgtgtcgatccgccagatcgatgccgacggc
aaggtcgtcaaggaatgccgcttcatgggcctctacacctcctcggtgtacggcgaaagc
gtgcgagtgattccttacatccgtcgcaaggttgcggaaatcgaacgtcgttcgggcttc
caggccaaggcgcacttgggcaaggaactggcccaagtggtcgaggtactgccccgtgat
gatctgttccagaccccggtggacgagctgttcagcaccgtgatgtcgatcgtgcagatc
caggaacgcaacaagatccgcgtgttcctgcgcaaagacccgtacggtcgcttctgctac
tgcctggcctacgtgccgcgggatatctattccaccgaagtgcgccagaagattcagcaa
gtcctgatggatcgcctgaaagcctcggactgcgagttctggaccttcttctccgagtcc
gtactggctcgtgtacagctgatcctgcgggtagacccgaagaaccgcttggacatcgac
ccgctgcaactggaaaaagaagtggtgcaggcctgccgcagctggcaggacgactactcc
agcctggtggtggaaagcttcggcgaagcccacggcaccaacgtgctggcggatttcccg
aaaggcttcccggccggctaccgtgagcgtttcgcggcgcattcggccgtggtcgacatg
cagcacttgctcagcctcaccgaagccaacccgctggtaatgagcttctaccagccattg
ggccaggtttccggtcagcgcgagttgcactgcaagctgtatcacgccgacaccccgctg
gcactgtccgacgtactgccgatcctggaaaacctcggcctgcgtgtactgggtgagttc
ccgtaccgcctgcgtcatgccaatggccgcgagttctggattcacgatttcgcgttcacc
gccgctgaaggcctgaaccttgatatccagcagctcaacgacaccctgcaggacgcgttc
gtgcacatcgtcaatggcgatgccgagaacgatgcgttcaaccgcctggtactgaccgcc
ggcctgccatggcgcgatgtggcgctgctgcgtgcctacgcccgttacctgaagcagatt
cgcctgggcttcgacctgggatacatcgccagcaccctgaacaaccacaccgacatcgcc
cgcgagttgacccggttgttcaagacccgcttctacctggcgcgcaagctgacggccgaa
gacctggaagacaagcagcaacgtctggagcaagcgattctcacggccctggacgacgtt
caggtgctcaacgaagaccgcatcctgcgtcgctacctggacctgatcaaggctaccttg
cggaccaacttctaccaggcggatgccaacggtcagaacaagtcgtacttcagcttcaag
ttcaacccgcacgccattccagaattgccgaagccggtgccgaagtttgaaatcttcgtt
tactcgccacgggttgaaggcgtgcacctgcgctttggtaacgtcgctcgcggtggcctg
cgctggtccgaccgtgaagaagacttccgcactgaagtattgggcctggtaaaagcccag
caagtgaaaaactcggtgatcgtgccggtgggcgccaagggcggcttccttccgcgtcgt
ctgccattgggcggcagccgggacgagatcgcggccgagggcatcgcctgctaccgcatc
ttcatttccggcctgctggacatcaccgacaacctgaaagacggcgtcctggtgcctccg
ttgaacgtggtgcgccacgacaacgatgacccgtacctggtagtagcagcggacaagggc
acagcgaccttctccgacatcgccaacggcatcgccatcgactatggcttctggctgggt
gacgcgttcgcttccggcggttctgccggttacgaccacaagaaaatgggcatcaccgcc
aagggcgcgtgggtgggtgtgcagcgtcacttccgtgagcgcggcatcaacgtccagcaa
gacagcatcaccgtggtgggcgtgggcgacatggccggcgacgtgttcggcaacggcctg
ttaatgtccgacaagctgcaactggttgcggccttcaaccacctgcacattttcatcgat
ccaaacccgaccccggccaacagtttcgctgaacgtcagcgcctgttcgacctgccgcgt
tcggcctggaccgactacgacaccagcatcatgtcggaaggtggcggtatcttctcgcgc
agcgcgaagagcattgccatctcgccgcagatgaaagaacgcttcgacatccaggctgac
aagctgaccccgaccgaactgctgaacgccttgctcaaggcgccggtggacctgttgtgg
aacggcggtatcggtacttacgtcaaggccagcaccgaaagccacgccgatgtgggcgac
aaggccaacgacgccctgcgcgtcaacggcaacgagttgcgctgcaaggtggtgggcgag
ggcggtaacctcggcatgacccaattgggtcgtgtggaattcggcctcaatggcggcggt
tccaacaccgacttcatcgacaacgccggtggtgtggattgctccgaccacgaagtgaac
atcaagatcctgctcaacgaagtggtgcaggccggcgacatgaccgacaagcagcgcaac
cagttgctggcgagcatgaccgacgaagtcggcagcctggtgttgggcaacaactacaag
caaacccaggccctgtccctggctgcccgcaaagccttcgagcgagcggccgagtacaag
cgcctgatgagcgacctggaaagccgtggcaagctggaccgcgccatcgagtacctgcct
tcggaagatcaactgaccgagcgtgccgccaccggcaagggcctgacccgtccggagctg
tcggtactgatctcctacagcaagatcgacctcaaggaagcgttgctcaagtccctggta
ccggatgacgactacctgacccgcgacatggagaccgcgttcccgccgagcctggtggcg
aagttctccgaagccatgcgtcgccatcgtctgaagcgcgagatcgtcagcacccagatc
gccaacgacctggtcaaccacatgggtatcacctttgttcaacggttgaaagagtccacc
ggcatgagccctgcgaacgtggccggtgcctacgtgatcgtgcgtgacatcttccacctc
ccgcactggttccgtcagatcgaagccctggaccaccaggtttcggctgaagtgcaactg
gcgttgatggacgaactgatgcgcctgggccgccgtgccacacgctggttcctgcgcagc
cgtcgcaacgagcaggatgctgcccgtgacgtcgcgcacttcggtccgcacctggcggcg
ttgggcctcaagctcgacgaactgctggaaggtccgacccgcgaaggctggcagaaccgt
taccaggcctatgtcgaagccggtgtgccggagctgttggcgcgcatggtggcaggcact
acccacctgtacaccttgctgccgatcatcgaagccgctgacgtgaccggtcagagcgcg
gcggacgtggccaaggcgtactttgccgtgggcagcgccctggacttgccgtggtacctg
cagcagatcagcgatctgccggtgggcaacaactggcaggcccaggcccgcgaagccttc
cgcgacgacgtggactggcagcaacgggcgatcaccatcaaggttctgcaaatggccgat
gcgccagaagacatggaagcccgcgtggcgctatggcttgagcagaacgcgagcatggtg
gagcgctggcgcgcgatgatggtggagattcgtgctgcggtcggtacggactacgccatg
tacgcggtagccaaccgtgagttgctggacctggcgatgagcggccagtcggtgctgtaa

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