Pseudomonas yamanorum: AK972_5988
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Entry
AK972_5988 CDS
T05821
Name
(GenBank) C4-type zinc finger protein, DksA/TraR family
KO
K06204
RNA polymerase-binding transcription factor
Organism
pym
Pseudomonas yamanorum
Brite
KEGG Orthology (KO) [BR:
pym00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
AK972_5988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pym03000
]
AK972_5988
03021 Transcription machinery [BR:
pym03021
]
AK972_5988
03009 Ribosome biogenesis [BR:
pym03009
]
AK972_5988
Transcription factors [BR:
pym03000
]
Prokaryotic type
Other transcription factors
Others
AK972_5988
Transcription machinery [BR:
pym03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription elongation factors
AK972_5988
Ribosome biogenesis [BR:
pym03009
]
Prokaryotic type
rRNA transcription factors
AK972_5988
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DksA_N
zf-dskA_traR
MS_N
IDEAL
Motif
Other DBs
NCBI-ProteinID:
AMW86788
UniProt:
A0A145XN69
LinkDB
All DBs
Position
6670463..6670867
Genome browser
AA seq
134 aa
AA seq
DB search
MTEQDLLAQPSADYMNEAQQGFFRELLLAQRNELQARIDAEFMVLREQEPNSDPADVGSA
EEQRQWQLRLLEREKKLLDKIDEALEHLARGEYGWCRETGEPIGLKRLLLRPTATLCIEA
KEREELRERHQRAI
NT seq
405 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaacaagaccttctcgcccaaccctccgccgactacatgaatgaagcccagcaa
ggtttcttccgcgagctgttgctggcccagcgtaatgagctgcaagcgcgcatcgatgcc
gaattcatggtgctgcgcgaacaggaacccaacagcgatcccgccgatgtgggcagtgct
gaagaacagcgccaatggcaactgcgcctgctggagcgcgaaaagaagctgttggacaag
atcgacgaggccttggagcacctggcccgaggcgaatacggctggtgccgtgaaaccggc
gagcccatcggcctcaagcgcctgttgctgcgccccacggccaccctgtgtatcgaagcc
aaagaacgtgaagagctgcgcgaacgccatcaacgggcgatttga
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