Polynucleobacter yangtzensis: PKF023_01680
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Entry
PKF023_01680 CDS
T08788
Symbol
murE
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pyt
Polynucleobacter yangtzensis
Pathway
pyt00300
Lysine biosynthesis
pyt00550
Peptidoglycan biosynthesis
pyt01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pyt00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PKF023_01680 (murE)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PKF023_01680 (murE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pyt01011
]
PKF023_01680 (murE)
Enzymes [BR:
pyt01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
PKF023_01680 (murE)
Peptidoglycan biosynthesis and degradation proteins [BR:
pyt01011
]
Precursor biosynthesis
Amino acid ligase
PKF023_01680 (murE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
YqeC
Mur_ligase
LpxK
PTS_EIIB_BC_N
CbiA
Motif
Other DBs
NCBI-ProteinID:
BDT76365
UniProt:
A0A9C7F9K7
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All DBs
Position
158931..160481
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AA seq
516 aa
AA seq
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MRVDLKIDTNHLIDHLHTLANSSAKVCADSRQIQSGDIFFAYPVGHGNALRDGRQFIHAA
LENGAAAVVFDPTGMDNQFIDHPQCFAVENLAAEAGQLCSQWYGNPSKELSIIGVTGTNG
KTSITQWLAQALDASNHRTAVLGTLGTGFPGALVQTGYTTPDAPKLQTQLAELLSAGAKQ
VAMEVSSHALDQYRIAGTDLNCAVFTNLTQDHLDYHGSMEEYAEAKAKLFQQSGLKHAVI
NLDDAFGRELAMNLLAKNDLKVWAYALSPAIFKGFEKFGDRLHRIYAKETALSGAGYDST
FVYDNAGSAQLHIPLLGEFNLSNALAVWTVLLTQDMSCELAAHKVSQLNPVLGRMELIQI
GKPQKTESLLAVVDYAHTPDALEKTLQALRPIADQRGGNIWCVFGCGGDRDAGKRSLMGA
VAERYADQILITSDNPRSEDPQAIMQMIRGGLKVDATNVQMIADRAAAIMAAVRNANARD
IVLVAGKGHETTQEINGKKFDFSDQEHIRLAAGGGI
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgagggtggacttgaaaatagacaccaatcacttgattgaccacttacacacactagcg
aattcctccgcaaaagtgtgtgcggatagtcgccagattcagtctggcgatatctttttt
gcctatccggtaggtcatggcaatgcattgcgcgatggacgtcaatttattcatgctgcc
ttagaaaatggagcagcagctgtggtgtttgatcctacgggtatggacaatcaatttata
gatcacccacaatgcttcgcagttgaaaatcttgctgcagaggcaggccagttgtgctct
cagtggtacggaaaccccagcaaagaattgagcattattggcgttactggtaccaatgga
aaaacaagtattactcagtggcttgctcaggctttagatgccagcaatcatcgtactgcg
gttttaggcactttaggaactggatttccaggtgctttagttcaaactggatatacaact
ccagatgctccaaagttacaaactcagctagcagagttgctcagcgcaggtgcaaagcaa
gtagccatggaagtatcttcacacgcattagatcaatatcgaatcgccggaactgactta
aattgcgcggtcttcaccaatctcacgcaagatcatttggattaccacggcagtatggaa
gagtacgccgaggcgaaagcgaagttatttcagcagtctggacttaagcatgcggtcatt
aatttggatgacgcatttggtcgtgagttagctatgaatctgttggctaaaaatgatttg
aaagtttgggcgtacgccttgtcgccagcaatatttaaaggttttgaaaaatttggtgac
cgattacaccgtatttatgcaaaagagactgcgttgagtggtgcaggctacgattccact
tttgtttatgacaatgcgggaagtgctcaattgcacatcccgttattgggtgaatttaat
ttaagtaatgcgcttgcagtatggacggtattgcttactcaagacatgagctgcgagctt
gcagcgcataaagtcagtcaattaaatccggtgcttgggcgtatggagttaattcagatt
ggcaagcctcaaaaaacagaaagcttattggcggttgtcgattacgcacatacgccagat
gctttagaaaaaactttgcaggctttgagacctattgcagatcagcgtggtggaaacatt
tggtgtgtatttggctgcggtggcgatagagatgccggaaaacgatcgctaatgggcgct
gttgcagagcgttatgccgatcaaattttgattactagtgacaatccacgctcagaggat
ccgcaagccatcatgcagatgattcgtggcggtctaaaagtggatgcaacaaatgttcag
atgattgccgatcgtgctgctgccattatggcggctgtgcgcaatgcgaatgctcgcgat
attgttttggtcgctggtaagggtcatgaaactacccaagaaattaatggcaagaaattt
gatttctctgaccaggaacatattcgcttggctgcagggggtggaatctaa
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