Polynucleobacter yangtzensis: PKF023_07940
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Entry
PKF023_07940 CDS
T08788
Symbol
mdH
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
pyt
Polynucleobacter yangtzensis
Pathway
pyt00020
Citrate cycle (TCA cycle)
pyt00270
Cysteine and methionine metabolism
pyt00620
Pyruvate metabolism
pyt00630
Glyoxylate and dicarboxylate metabolism
pyt00680
Methane metabolism
pyt00710
Carbon fixation by Calvin cycle
pyt00720
Other carbon fixation pathways
pyt01100
Metabolic pathways
pyt01110
Biosynthesis of secondary metabolites
pyt01120
Microbial metabolism in diverse environments
pyt01200
Carbon metabolism
Module
pyt_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pyt_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pyt_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
pyt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PKF023_07940 (mdH)
00620 Pyruvate metabolism
PKF023_07940 (mdH)
00630 Glyoxylate and dicarboxylate metabolism
PKF023_07940 (mdH)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
PKF023_07940 (mdH)
00720 Other carbon fixation pathways
PKF023_07940 (mdH)
00680 Methane metabolism
PKF023_07940 (mdH)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
PKF023_07940 (mdH)
Enzymes [BR:
pyt01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
PKF023_07940 (mdH)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldh_1_C
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
BDT76991
UniProt:
A0A9C7FBB7
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All DBs
Position
complement(790960..791949)
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AA seq
329 aa
AA seq
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MAKAPMRVAVTGAAGQIGYSLLFRIANGDLLGKDQPVILQLLEIPDEKAQKALTGVMMEL
EDCAFPLLAGMTAHSDPMTAFKDIDVALLVGARPRGPGMERKDLLSANAQIFTAQGKALN
AVAKKTVKVLVVGNPANTNAYIAMKSAPDIPAKNFTAMLRLDHNRALSQLANKLNKPVAD
IEKLVVWGNHSPTMYPDYRFATIDGKSVKDSINDAAWNKDVFIPTVGKRGAAIIEARGLS
SAASAANAAIDHIHDWVLGTNGKWVTMGIPSKGEYGIPAEVIYGFPVVCENGEYKMIEGL
EIDEFSRERMTHTLNELLEEQAGVKHLLS
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagccccaatgcgtgtcgccgtaaccggtgcagccggtcaaatcggatattcc
cttttattccgtatcgccaatggcgaccttttgggcaaagatcagcccgtaatcttgcaa
ttgctagagattcctgatgaaaaagcacaaaaagcattaactggcgtgatgatggagttg
gaagactgcgcattcccactcttggctggcatgacagctcactcagatccaatgacagcg
tttaaagatatcgacgttgctcttttagtcggcgcacgtccacgtggtcctggcatggag
cgtaaagatctactctccgctaacgcacaaattttcacagcacaaggtaaagcattgaat
gctgttgctaagaagactgtaaaagtattggttgttggcaacccagcaaacactaacgct
tacattgccatgaaatctgctccagacattcctgcgaaaaactttacagcgatgttacgt
ctcgaccacaaccgtgctctctcacaattggctaacaagttgaacaagcctgttgccgat
attgagaaattagttgtttggggcaaccacagcccaacaatgtatccagactatcgcttt
gcaaccatcgatggcaagtcagttaaagactctatcaacgatgcagcatggaacaaagat
gtatttattcctactgttggtaaacgtggtgcagccatcattgaagctcgcggcctttct
tctgcagcctctgcagcgaacgcagcgattgatcatattcatgactgggtactcggtaca
aacggtaagtgggtaactatgggtattccttctaaaggcgaatacggcattcctgctgaa
gtgatttatggcttcccagtagtttgcgaaaacggcgaatacaaaatgatcgaaggttta
gagatcgacgagttctcccgtgagcgcatgacacacaccttgaatgaattactcgaagag
caagctggcgttaagcacctgctctcataa
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