Polynucleobacter yangtzensis: PKF023_08040
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Entry
PKF023_08040 CDS
T08788
Symbol
leuD
Name
(GenBank) 3-isopropylmalate dehydratase small subunit
KO
K01704
3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
pyt
Polynucleobacter yangtzensis
Pathway
pyt00290
Valine, leucine and isoleucine biosynthesis
pyt00660
C5-Branched dibasic acid metabolism
pyt01100
Metabolic pathways
pyt01110
Biosynthesis of secondary metabolites
pyt01210
2-Oxocarboxylic acid metabolism
pyt01230
Biosynthesis of amino acids
Module
pyt_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
pyt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
PKF023_08040 (leuD)
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
PKF023_08040 (leuD)
Enzymes [BR:
pyt01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
PKF023_08040 (leuD)
4.2.1.35 (R)-2-methylmalate dehydratase
PKF023_08040 (leuD)
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GFIT
Motif
Pfam:
Aconitase_C
Motif
Other DBs
NCBI-ProteinID:
BDT77001
UniProt:
A0A9C7CA55
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All DBs
Position
799633..800280
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AA seq
215 aa
AA seq
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MEKFTVYKGLVAPLNRENVDTDAIIPKQFLKSIKKTGFGQNLFDEWRYLDHGEPGQDCST
RPINPDFVLNQPRYKGAGILLARKNFGCGSSREHAPWALDQYGFRAVIAPSFADIFYNNC
FKNGVLPIVLTEMQVDHLFNETMAFNGYQLTIDLEAQQVIAPDGTAYSFDVAPFRKYCLL
NGLDDIGLTLQHADKIKAYEAERILKMPWLATQLP
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaatttacggtatacaaaggtttagttgctccgcttaatcgcgagaacgtggat
accgacgccatcattccaaagcaattcttaaagtccattaaaaaaactggctttgggcaa
aatctctttgatgaatggcgctatctagaccacggtgagcctggtcaagattgcagcact
cgtccaattaatcccgactttgtcctaaatcaacctcgctataaaggtgcaggtattctg
ttagctcgcaagaactttggttgtggcagctcccgtgagcacgcgccatgggcattagat
caatacggttttagagcagttatcgccccaagctttgcggatattttttataacaactgc
ttcaaaaatggcgttttacccattgttttgacagaaatgcaggtggatcatctatttaat
gaaaccatggctttcaatggttaccagttgacgattgatctagaggctcagcaggtcatc
gcccctgatggcaccgcctatagcttcgatgtcgccccctttaggaaatattgccttctt
aatggcttagacgatattggcttaacactgcaacatgcagataaaatcaaggcttatgaa
gctgaacgcatcctcaagatgccttggcttgcgacacaattgccgtaa
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