Polynucleobacter yangtzensis: PKF023_08700
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Entry
PKF023_08700 CDS
T08788
Symbol
sucA
Name
(GenBank) 2-oxoglutarate dehydrogenase subunit E1
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
pyt
Polynucleobacter yangtzensis
Pathway
pyt00020
Citrate cycle (TCA cycle)
pyt00785
Lipoic acid metabolism
pyt01100
Metabolic pathways
pyt01110
Biosynthesis of secondary metabolites
pyt01120
Microbial metabolism in diverse environments
pyt01200
Carbon metabolism
pyt01210
2-Oxocarboxylic acid metabolism
Module
pyt_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pyt_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pyt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PKF023_08700 (sucA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
PKF023_08700 (sucA)
Enzymes [BR:
pyt01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
PKF023_08700 (sucA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
DUF1542
Motif
Other DBs
NCBI-ProteinID:
BDT77067
UniProt:
A0A9C7CY51
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All DBs
Position
857732..860587
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AA seq
951 aa
AA seq
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MMQDQRDNSYLFGGNAPYVEELYESYLHDPASVADHWRDYFDNVKQVPAVDGSSRTDIAH
GPIVASFAERAKQGPIRTISDSADSEMGRKRVAVQQLIAAYRNVGNRWANLDPLKRTERQ
DIPELDPAFYGFTDGDMDIVFNTSNTFFGKNEMSLRDLLQALRETYCGTIGVEFMFIADQ
KIKKWWQEKLESIRSTPQFNVEEKRQILDRVTAAEGLERYLQAKYVGQKRFSLEGGESFI
ACMDELIRDAGNRGVQEIVIGMAHRGRLNVLVNTLGKMPKDLFAEFEHKGPETLPAGDVK
YHQGFSSDISTPGGPVHLSLAFNPSHLEIVNPVVEGSARARMERRGDMLGDQVMPILVHG
DAAIAGQGVMQETLAMSEVRGYSTGGTVHIVINNQIGFTTSDPRDLRSSLYCTDIMKVVD
APVLHVNGDDPEAVVLATKLAVEFRMKFHKDVAIDIICFRKLGHNEQDTPAMTQPLMYKI
IAAHPGTRKLYADKLETQGVLPAGTGDLMVKEYRAAMDEGKQTSDPVLSNFKGKFAVDWS
PFLNKKWTDEADTAIPLTEWKRLAEKISTIPEGFKAHPLVAKVYNDRAAMGRGETNIDWG
MGEHMAFASLVASGYPVRLSGEDSGRGTFTHRHAVLHEQNREKWDTGTYIALQHVTKDQA
PFVVIDSILSEEAVLGFEYGYAAAEPNTLTIWEAQFGDFANGAQVVIDQFIASGEVKWGR
ANGLVMMLPHGYEGQGPEHSSARLERFMQLCADTNMQVIQPTTAAQIFHVLRRQMIRQFR
KPLILMTPKSLLRNKEAASPLSEFTKGGFQTVIGERDESIDAKQVTRLVMCSGKVYYDLV
KQRAEKKIGDVAIIRLEQLYPFPHKAVTAEMKKYPKLEDVVWCQDEPQNQGAWFFVQHNI
LENMSDGMKLGYAGRPASASPACGYAHLHQEQQKSLLNAAFAKLKGYVITK
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaggatcaaagagataattcatatctcttcggcggaaacgccccctacgtagag
gaactctacgaatcctacttgcacgatccagcttccgtagctgatcattggcgagattat
ttcgataacgtgaaacaggttccagcagttgatggttcatctcgaactgacattgcacac
ggaccgattgttgcttcatttgctgagcgcgctaagcaaggtcctatcagaacgatttct
gattcggctgactcagagatgggccgcaaacgcgttgctgttcagcagttaattgccgcg
tatcgtaacgtcggcaatcgctgggcaaacttagatccattaaagcggacagagcgccag
gacattcctgagttagatcccgctttctatggctttactgatggcgatatggatatcgtc
ttcaatacaagtaatacattcttcggtaagaacgaaatgtctttgcgcgacttgctccaa
gctttgcgcgaaacatattgcggcacgattggtgtcgagttcatgttcattgccgatcaa
aagattaagaagtggtggcaagagaagttggagtccattcgctcaactccacaatttaat
gtggaagagaagcgtcaaattttggatcgcgttacggctgctgaaggtctagagcgttac
ctccaggctaagtatgttggtcaaaagcgcttctccttagagggtggcgagagctttatc
gcttgtatggacgagttgattcgtgatgcaggtaatagaggcgttcaagagattgttatt
ggtatggcccaccgtggtcgtctcaacgtattggtaaacaccttgggcaaaatgcctaaa
gacctgtttgctgagtttgagcacaaaggccctgaaacattgcctgcgggtgacgtgaag
taccaccaaggcttctcaagcgatatttctactcctggcggtccggttcacttgtcatta
gcatttaacccatcccatttggagatcgttaacccagtggttgaaggatctgcacgtgct
cgtatggagcgtcgcggtgatatgttgggtgatcaagttatgccaatcttggttcacggt
gatgctgcgattgcaggtcagggtgtgatgcaagaaacattggcgatgtctgaggttcgt
ggttactcaaccggcggcacagtgcacattgtgattaacaaccaaatcggtttcacaact
tctgatccacgtgacttgcgttctagcttgtactgtaccgacatcatgaaggttgttgat
gcgcctgtattgcacgtgaacggtgatgatcctgaggcggtagtcttggcaaccaagttg
gctgttgagttccgcatgaagttccataaagacgtggcgattgacattatctgtttccgt
aagcttggtcacaacgaacaagatacgcctgcaatgacccagccattgatgtacaagatc
attgctgcacaccctggcacacgtaagctatacgccgacaagttagaaactcaaggcgta
ttgccggccggtactggtgacctgatggttaaagagtatcgcgctgcaatggatgaaggt
aagcagacatctgatccagtgttgagcaacttcaaaggtaagtttgctgtggattggtct
ccattcttaaataagaagtggactgatgaagctgatacagcaattccgttgactgagtgg
aagcgcttggctgagaagatttctactattccagaaggtttcaaggcgcatccattggtt
gctaaggtttataacgaccgtgcagcaatggggcgtggtgagacaaatatcgactggggt
atgggtgagcacatggctttcgcatccctggttgcaagcggctacccagttcgcttgtct
ggtgaagatagtggacgcggtacctttactcatcgtcacgcggtattgcatgagcaaaac
cgcgagaagtgggataccggtacttacattgcgcttcagcatgtcactaaggatcaagca
ccgtttgtggtgattgactccattctttctgaagaagcagttcttggattcgagtacggt
tacgctgcagctgaaccaaatactctcactatctgggaagctcaattcggtgactttgct
aacggcgcacaggttgttattgaccagttcatcgcttctggagaagtgaagtggggtcgt
gccaatggtttagtgatgatgttgccgcacggttatgaaggtcaaggcccagagcattcc
tctgcacgtcttgagcgctttatgcagttatgcgctgataccaatatgcaggttattcag
ccgactactgcagcgcaaatcttccacgtattgcgtcgtcagatgattcgtcagttccgc
aagccgctgatcttgatgacaccaaaatcattgctgcgtaataaagaagctgcatcacct
ttatctgaatttacaaaaggtggtttccagactgttattggtgagcgtgatgagtctatc
gacgcaaaacaagtcacccgtttggtaatgtgctctggcaaagtctattacgacttggtt
aagcagcgtgccgagaagaagattggcgatgttgccattattcgcttggagcagttgtat
ccattcccgcacaaagcagtgactgctgaaatgaagaaatatcccaagttggaagacgtg
gtttggtgtcaagatgagccacaaaaccaaggtgcttggttcttcgtgcaacacaatatc
ttggaaaacatgtctgatggcatgaagttgggctatgcaggccgtcctgcatcagcatca
ccagcttgtggttatgcccatctccaccaagaacagcagaagtctttgctgaatgcagca
tttgccaaactcaaaggttacgtgatcacgaaataa
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