Puma yagouaroundi (jaguarundi): 121018820
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Entry
121018820 CDS
T07555
Symbol
AGRN
Name
(RefSeq) agrin isoform X1
KO
K06254
agrin
Organism
pyu
Puma yagouaroundi (jaguarundi)
Pathway
pyu04512
ECM-receptor interaction
pyu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pyu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121018820 (AGRN)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121018820 (AGRN)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pyu00535
]
121018820 (AGRN)
Proteoglycans [BR:
pyu00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
121018820 (AGRN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_1
Kazal_2
Laminin_G_2
Kazal_1
EGF_laminin
Kazal_CFAI
SEA
EGF
Laminin_G_3
hEGF
Motif
Other DBs
NCBI-GeneID:
121018820
NCBI-ProteinID:
XP_040313787
LinkDB
All DBs
Position
Unknown
AA seq
1933 aa
AA seq
DB search
MPPLPLERDPRQQRGVSLLVRYFMIPCNVCLILLATSTLGFAVLLFLNNYKPGTHFTPAP
PVPPDACRGMLCGFGAVCEPSAAGSGGASCVCKKSACPAVVAPVCGSDASTYSNECELQR
AQCSQQRRIRLLSRGPCGSRDPCSNVTCSFGSTCVRSADGQTATCLCPATCRGPPDGPVC
GSDGADYPSECQLLRHACARQENIFKKFDGPCDPCQSARSDLSRICRVNPRTRRPEMLLR
PESCPPRQAPVCGDDGVTYDNDCTMGRTGAARGLLLQKVRSGQCQPQDQCPDVCRFNAVC
LIRRGRPRCSCDRVICDGAYRPVCAHDGHTYDSDCWRQQAECQQQRAIPAKHQGPCDQPL
SPCLGVQCPFGAACAVKNGEAECVCQQACSGIYDPVCGSDGVTYGSTCELEATACTLGRE
IRVARRGPCDRCGQCRFGALCEAETGRCVCPSECVALAQPVCGSDGHTYASECELHVHAC
THQISLRVVSAGRCQTCGDTVCAFGAVCLAGRCVCPRCERPPPGPVCGSDGVTYHSACEL
REAACQQQTRIEEARAGPCEQAECGSGGSGSGEDGECEQELCRQHGGVWDEDSEDGPCVC
DFSCQSIPRSPVCGSNGVTYGTECELKKARCELKRELYVAAQGTCRGPTLAPLPPAVPPH
CTQTPYGCCQDNITAARGVGLAGCPSSCHCNPHGSYSGTCDPATGQCSCRPGVGGLKCDR
CEPGFWNFRGIVTDGRSGCTPCSCDPRGAVRDDCEQMAGLCSCKPGVAGPKCGQCPDGHT
LGPAGCETDSLAPETCAEMRCEFGASCVEEAGSAHCVCPTPTCPEASATKVCGSDGVTYG
NECQLRTIACRQGLDISIQSLGPCQDSLFLAEAIASGARPTSPAPVATLGLNVSRALPPP
PSALPLTPGSTPHSRPTPRPSPGPWTTARIPRTTTRPVLTMPPTAPATAPNLATSAFGES
GSADGSGDEELSGDLEASGTGSGGLEPPEGGSAVTPGPPLERASCYNSPLGCCSDGKTPS
LDTEGSNCPATKAFQGVLELEGVEGQELFYTPEMADPKSELFGETARSIESTLDDLFRNS
DVKKDFRSVRLRDLGPGSSVRAIVDVHFDPATTFRAPDVGQALLRQIQASRRRSLGVRRP
LQEHVRFMDFDWFPAFFTGATTGATPAAATARATTVAHLPSAVTQRALYPSHTSRPVGRT
TALPTTRQLPTTAPRHVPGRRPLPPGTRQPPRPCDSQPCLHGGTCRDQDSGGGFTCSCPV
GRRGDTCEKALQPSLPAFGGHSFLAFPTLRAYHTLRLALEFRTWEPQGLLLYNGNARGKD
FLSLTLLGGRVQLRFDTGSGPAVLTSSVPVEPGRWHRLELSRHWRRGTLSVDGETPVVGH
SPSGTDGLNLDTDLFVGGVPADQASVVLERTSVSVGLKGCIRLLDINNQRLELSSWQGTV
TRSSGVGATCSDGENPCEPNPCHGAAPCRVLPEGEAKCECPQGRGGALCQTVSKQDYPRP
FLADFSGFSYLELEGLHTFARDLGEKMALEVVFLARGPSGLLLYNGQKTDGKGDFVSLAL
HDRFLEFRYDLGKGAAVIRSKEPVALDTWTRVSLERSGRKGAMRVSDGPRVLGESPKSRK
VPHTVLNLKEPLYVGGAPDFSKLARAAAVSSGFDGVIQLVSLKGHQLLTQEHVLRAVDVS
SFTHHPCTQASGHPCLNGASCLPREASYECLCPGGFSGLHCEKGLIEKSAGDLDALAFDG
QTYVEYLNAVTESELTNEIPAPEAPDSGALPSEKAVRSNHFELSLRTEATQGLVLWSGKA
TERADYVALAIVDGRLQLTYDLGSQPVVLRSTVPVNTNRWLRVRAHREQREGSLQVGNEA
PVTGSSPLGATQLDTDGALWLGGLEKPPMGQALPKAYSTGFVGCLRDVVVGQRPLHLLED
AVTKPGLRACAAP
NT seq
5802 nt
NT seq
+upstream
nt +downstream
nt
atgcctccactacctctggagagggacccgcggcagcagcgcggggtctccctgctggtc
cggtatttcatgatcccctgcaacgtctgcctgatcctgctggccacctccacgctgggc
ttcgccgtgctgcttttcctcaacaactacaaacctgggacccatttcacaccagcacct
ccagtgcctccggacgcatgccgaggaatgttgtgtggctttggcgccgtgtgtgagccc
agcgcggcaggttccggcggagcctcctgtgtgtgcaagaagagtgcctgtccggctgtg
gtggcgcctgtgtgtggctccgacgcctccacgtacagcaacgagtgtgagctccagcgg
gcgcagtgcagccagcagcgacgcatccgcctcctcagccgcgggccctgtggctcccgg
gacccctgctccaatgtgacgtgcagcttcggcagcacctgtgtgcgctcagcagacggg
cagacggccacgtgcctgtgcccggccacctgccgggggccccctgacggccccgtgtgt
ggcagcgacggggccgactaccccagcgagtgccagctcctgcgccacgcatgcgcgcgc
caagagaacatcttcaagaagttcgacggcccttgtgacccttgccagagcgcccgcagt
gacctaagtcgtatctgccgtgtgaacccacgcacgcggcgccctgagatgctgctgcgg
ccagagagctgccctcctcggcaggcacccgtgtgcggggatgacggggtcacctacgac
aacgactgtacgatgggccgcacgggagctgcccgtggcctcctcctccagaaagtgcgc
tccggccagtgccagcctcaagaccagtgcccagatgtgtgcaggttcaacgccgtgtgc
ctgatccgccggggtcgcccccgctgctcctgtgaccgcgtcatctgcgacggggcctac
agacctgtgtgcgcccacgacgggcacacctacgacagtgactgctggcgccagcaggct
gagtgtcaacagcagcgcgccatccctgccaagcaccagggcccgtgtgaccagcccctg
tccccgtgccttggggtgcagtgcccgtttggggcagcgtgtgctgtgaagaacggggaa
gctgagtgtgtgtgccagcaggcgtgttcgggcatctacgatcctgtgtgtggcagtgat
ggcgtcacgtacggcagcacgtgtgagctggaagccacggcctgcacccttggacgggag
atccgggtggctcgcagaggaccctgtgaccgctgtgggcagtgccgcttcggagctctg
tgtgaggctgagaccgggcgctgcgtgtgcccctccgagtgcgtggccctggcccagcct
gtgtgcggctctgacgggcacacgtatgccagcgagtgtgagctacacgtccacgcctgc
acacatcagatcagcctgcgtgtggtctcggctggacgctgccagacctgcggagacacg
gtgtgtgcctttggcgcggtgtgcttggccggacggtgtgtgtgtccccggtgtgagcgc
cccccacccggccccgtgtgtggcagtgacggtgtcacctaccacagcgcctgtgagctc
cgagaggctgcctgccagcagcagacgcggatcgaggaggcccgggcagggccctgtgag
caggccgagtgcggctctggaggctctggctccggagaggacggcgagtgtgagcaggag
ctgtgccggcagcatggcggcgtctgggacgaggactcggaagacgggccctgcgtctgt
gacttcagctgccagagcatcccgaggagccccgtgtgtggctccaacggggtcacctac
ggcaccgagtgcgagctgaagaaggcccggtgtgagctgaagcgggaactgtacgtcgcg
gcccagggaacctgccgtggccccaccctggccccgctgccacctgcagttcccccgcac
tgcacccagaccccctacggctgctgccaggacaacatcactgctgcccgcggtgtgggc
ctggctggctgccccagctcctgccactgcaacccacatggctcctacagtggcacctgt
gacccagccacaggccagtgctcctgccgcccaggggtcgggggcctcaagtgtgatcgc
tgtgagcctggcttctggaacttccgtggcattgtcaccgatggccggagcggctgcact
ccctgcagctgtgacccccggggtgctgtgcgggacgactgcgagcagatggcagggctg
tgctcatgtaagcctggggtggcgggacccaagtgcgggcagtgtccggacggccacacc
ctgggccctgctggctgtgagacagactccttggcacccgagacctgtgctgagatgcgc
tgcgagtttggggcatcctgcgtggaggaagctggctccgcacactgcgtgtgcccaaca
cccacctgtccagaggccagtgccaccaaggtctgtgggtcggacggagtcacctacggc
aatgagtgccaactgaggaccatcgcctgccgccagggcttggacatctctatccagagc
cttggcccatgccaggactctctttttcttgcagaggctattgcttctggtgcccgccca
acatctcctgcacccgtggccaccttggggctcaacgtgagcagggcgctgccgccccca
cccagcgccctccccctgactcccggcagtacccctcacagccggcccactccccgaccc
tcaccgggaccttggaccactgcccgcatccccaggacaaccacgaggcccgtgctgacc
atgccccccacggcccctgccacagcccccaatctcgccacatctgcctttggcgaatcc
ggcagtgctgatgggagcggcgatgaggaactgagtggtgacctggaagccagtgggacg
ggctcagggggactcgagccccctgaaggtggcagtgctgtgacccctgggccacccctg
gagagggcttcttgctacaactcgcctttgggctgctgctcggatggcaagacgccctcg
ctggacacagaaggttccaactgtcctgccaccaaggcgttccagggtgtgctggagctt
gagggagtcgaggggcaagagctgttctatacaccggagatggctgaccccaagtcagag
ctttttggggagaccgctaggagtatcgagagcacactggatgacctcttccggaactca
gacgttaagaaggacttccgaagtgtccgcctgcgggacctggggcctggcagctcagtc
cgagccattgtggacgtgcactttgatcctgccacgacctttagggcacccgacgtgggc
caggccctgctccggcagatacaggcctctaggcgccggtccctgggggtcaggcggcca
ctgcaggagcacgtgcgcttcatggactttgactggtttcctgcgttcttcacgggagcc
accacgggagccacacctgccgccgccacggccagggccaccactgtggcccacctgcct
tctgctgtgacccagcgggccctctaccccagtcacacaagccggcctgttggcaggacc
acagccctgcccacgacacgccagctccccaccactgccccccgtcatgtgcctggacgc
cggcccttgcccccaggcacccggcagccaccaaggccctgtgactcccagccctgcctc
cacggagggacctgccgggaccaagactcaggtggaggcttcacctgtagctgcccagtg
ggcaggaggggagacacctgcgagaaggcactgcagccctcactgccagccttcggaggc
cactccttcctggccttccccaccctccgtgcctaccacacactgcgcctggcgctcgag
ttccggacgtgggagccacaggggctgctgctctacaatggcaacgcccggggcaaggac
ttcctgtcgctgacattgctggggggccgcgtgcagctcaggtttgacacaggttcgggg
cccgcggtactgaccagctcagtgcctgtagagcctggccgctggcatcgcttggagctg
tctcggcactggcgccggggtaccctctcagtggatggtgagacccctgttgtgggccac
agccccagtggtacagatggtctcaacctggacacagacctctttgtgggcggcgtccca
gcggaccaggcttccgtggtgctcgaaaggacctccgtcagtgttggcctcaagggctgc
atccgcctgctagacatcaacaatcagcggttggagctcagcagctggcaggggacagta
acccgaagctctggtgtgggtgcaacctgtagtgatggcgagaacccctgtgagccgaac
ccttgccacggggcagccccttgccgtgtgctgcctgagggcgaggccaagtgcgaatgc
ccccagggacgagggggcgccctctgtcagacagtctccaagcaggattatccccggccc
ttcctggctgacttcagcggcttctcctacctggagctggaaggcctgcatacgtttgcg
cgagatctaggggagaagatggcgctggaggtggtgttcctggcccgtggccccagtggc
ttgctcctctacaatgggcagaagacagatggcaagggggactttgtgtcactggcgttg
cacgatcgattcctggagttccgctatgacctgggcaagggggcagcggtcatcaggagc
aaggagccagtggccctggacacctggaccagggtctcactggagcgcagtggccgcaag
ggcgccatgcgtgtcagtgacgggccccgagtgctgggggagtccccgaagtcccgcaag
gtgccacacacagtcctcaacctgaaggagccgctctatgtcggaggggctcctgatttc
agcaagctggcccgggcagctgcagtgtcctccggctttgacggcgtcatccagctggtc
tccctgaaaggccaccagctgctgacccaggagcacgtgctgcgggcagtggacgtctcg
tctttcacacaccacccttgtacccaggcctcgggccacccctgcctcaacggggcctcc
tgcctccctcgggaggcctcctatgagtgcctgtgtcctgggggcttctcggggcttcac
tgcgagaaggggctgattgagaagtcggcaggggatctggatgccctagccttcgacgga
caaacctacgttgaatatctcaatgccgtgaccgagagcgagctgaccaatgagatccca
gctcctgaagctccggattccggggccctccccagtgagaaggcagtgcgcagcaaccac
tttgagctgagcctgcgcacagaggccacacaggggctggtgctgtggagcgggaaggcc
acagagcgggctgactacgtcgctctggccatcgtggatgggcgcctgcagctgacctac
gacttgggctcccagcccgtggtgctgcgttccaccgtgccggtcaacaccaaccgctgg
ttgcgggtgagggcacacagggaacagagggaaggatccctccaggtgggcaatgaggcc
cctgtgactggctcttccccgctgggtgccacacagctagacacagacggagccctatgg
ctgggtggcctggagaagccgcccatgggccaggccctgcccaaagcctacagcacaggc
tttgtgggctgcctccgggatgtagtggtgggccagcgcccactgcacctgctggaagat
gctgtcaccaagccggggcttcgggcctgcgccgccccgtga
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