Herpailurus yagouaroundi (jaguarundi): 121021006
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Entry
121021006 CDS
T07555
Name
(RefSeq) TAR DNA-binding protein 43
KO
K23600
TAR DNA-binding protein 43
Organism
pyu
Herpailurus yagouaroundi (jaguarundi)
Pathway
pyu03015
mRNA surveillance pathway
pyu05014
Amyotrophic lateral sclerosis
pyu05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
pyu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121021006
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
121021006
05022 Pathways of neurodegeneration - multiple diseases
121021006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pyu03019
]
121021006
Messenger RNA biogenesis [BR:
pyu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
121021006
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TDP-43_C
TDP-43_N
RRM_1
RRM_7
RRM_PARP14_3
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
121021006
NCBI-ProteinID:
XP_040317056
LinkDB
All DBs
Position
Unknown
AA seq
414 aa
AA seq
DB search
MSEYIRVTEDENDEPIEIPSEDDGTVLLSTVTAQFPGACGLRYRNPVSQCMRGVRLVEGI
LHAPEAGWGNLVYVVNYPKDNKRKMDETDASSAVKVKRAVQKTSDLIVLGLPWKTTEQDL
KEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQRHMIDGRWCDCKLPNS
KQSPDEPLRSRKVFVGRCTEDMTADELQQFFCQYGEVVDVFIPKPFRAFAFVTFADDQVA
QSLCGEDLIIKGISVHISNAEPKHNSNRQLERSGRFGGNPGGFGNQGGFGNSRGGGAGLG
NNQGSNMGGGMNFGAFSINPAMMAAAQAALQSSWGMMGMLASQQNQSGPSGNNQSQGNMQ
REPNQAFGSGNNSYSGSNSGAAIGWGSASNAGSGSGFNGGFGSSMDSKSSGWGM
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaatatattcgggtaaccgaagatgagaacgacgagcccattgaaataccatca
gaagacgacgggacggtgctgctgtccacggttacggcccagtttccaggggcctgtggg
ctgcgctacaggaatccagtgtctcagtgtatgagaggcgtccggttggtggaaggaatt
ctgcatgctcccgaagccggctggggaaatctggtatatgttgtcaactatcccaaagat
aacaaaagaaaaatggacgagacggatgcttcttcagcagtgaaagtgaaaagagctgtc
cagaaaacatctgatttaatagtgttgggtctcccgtggaaaacaactgaacaggatcta
aaagaatattttagtacctttggagaggttcttatggttcaggtcaagaaagatctcaaa
actggtcattcaaaggggtttggttttgttcgttttacggaatatgaaacccaggtgaaa
gtaatgtcacagcgacatatgatagacggacgatggtgtgactgtaaacttcctaattct
aagcaaagcccagatgagcctttgagaagcaggaaggtgtttgttgggcgctgtacagag
gacatgaccgctgatgagctgcagcagtttttttgccagtatggagaagtggtagacgtc
ttcattcccaaaccgttcagggcttttgccttcgtgacgtttgcagacgatcaggttgcc
cagtctctttgtggagaggacttgatcattaaaggaatcagcgtccatatatccaatgct
gaacctaagcacaatagcaatagacagttagaaagaagtggaagatttggtggtaatcca
ggtggctttgggaatcagggtggttttggtaacagtcgagggggtggagctggtttggga
aacaatcaaggtagtaatatgggtggggggatgaactttggcgcttttagcattaatccg
gcaatgatggcggctgcccaggcggcactgcagagcagctggggcatgatgggcatgtta
gccagtcagcagaaccagtcaggcccatcgggtaataaccaaagccaaggcaacatgcag
agggagccaaatcaggcctttggttctggaaataactcctatagtggttctaattcaggt
gcagcgatcggttggggatctgcatcaaatgcagggtcgggcagcggttttaacggaggc
tttggctcaagcatggattctaaatcttcgggctggggaatgtag
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