KEGG   Herpailurus yagouaroundi (jaguarundi): 121021006
Entry
121021006         CDS       T07555                                 
Name
(RefSeq) TAR DNA-binding protein 43
  KO
K23600  TAR DNA-binding protein 43
Organism
pyu  Herpailurus yagouaroundi (jaguarundi)
Pathway
pyu03015  mRNA surveillance pathway
pyu05014  Amyotrophic lateral sclerosis
pyu05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:pyu00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    121021006
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    121021006
   05022 Pathways of neurodegeneration - multiple diseases
    121021006
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pyu03019]
    121021006
Messenger RNA biogenesis [BR:pyu03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Negative regulators of mRNA 3' end processing
     121021006
SSDB
Motif
Pfam: TDP-43_C TDP-43_N RRM_1 RRM_7 RRM_PARP14_3 RRM_3 RRM_5
Other DBs
NCBI-GeneID: 121021006
NCBI-ProteinID: XP_040317056
LinkDB
Position
Unknown
AA seq 414 aa
MSEYIRVTEDENDEPIEIPSEDDGTVLLSTVTAQFPGACGLRYRNPVSQCMRGVRLVEGI
LHAPEAGWGNLVYVVNYPKDNKRKMDETDASSAVKVKRAVQKTSDLIVLGLPWKTTEQDL
KEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQRHMIDGRWCDCKLPNS
KQSPDEPLRSRKVFVGRCTEDMTADELQQFFCQYGEVVDVFIPKPFRAFAFVTFADDQVA
QSLCGEDLIIKGISVHISNAEPKHNSNRQLERSGRFGGNPGGFGNQGGFGNSRGGGAGLG
NNQGSNMGGGMNFGAFSINPAMMAAAQAALQSSWGMMGMLASQQNQSGPSGNNQSQGNMQ
REPNQAFGSGNNSYSGSNSGAAIGWGSASNAGSGSGFNGGFGSSMDSKSSGWGM
NT seq 1245 nt   +upstreamnt  +downstreamnt
atgtctgaatatattcgggtaaccgaagatgagaacgacgagcccattgaaataccatca
gaagacgacgggacggtgctgctgtccacggttacggcccagtttccaggggcctgtggg
ctgcgctacaggaatccagtgtctcagtgtatgagaggcgtccggttggtggaaggaatt
ctgcatgctcccgaagccggctggggaaatctggtatatgttgtcaactatcccaaagat
aacaaaagaaaaatggacgagacggatgcttcttcagcagtgaaagtgaaaagagctgtc
cagaaaacatctgatttaatagtgttgggtctcccgtggaaaacaactgaacaggatcta
aaagaatattttagtacctttggagaggttcttatggttcaggtcaagaaagatctcaaa
actggtcattcaaaggggtttggttttgttcgttttacggaatatgaaacccaggtgaaa
gtaatgtcacagcgacatatgatagacggacgatggtgtgactgtaaacttcctaattct
aagcaaagcccagatgagcctttgagaagcaggaaggtgtttgttgggcgctgtacagag
gacatgaccgctgatgagctgcagcagtttttttgccagtatggagaagtggtagacgtc
ttcattcccaaaccgttcagggcttttgccttcgtgacgtttgcagacgatcaggttgcc
cagtctctttgtggagaggacttgatcattaaaggaatcagcgtccatatatccaatgct
gaacctaagcacaatagcaatagacagttagaaagaagtggaagatttggtggtaatcca
ggtggctttgggaatcagggtggttttggtaacagtcgagggggtggagctggtttggga
aacaatcaaggtagtaatatgggtggggggatgaactttggcgcttttagcattaatccg
gcaatgatggcggctgcccaggcggcactgcagagcagctggggcatgatgggcatgtta
gccagtcagcagaaccagtcaggcccatcgggtaataaccaaagccaaggcaacatgcag
agggagccaaatcaggcctttggttctggaaataactcctatagtggttctaattcaggt
gcagcgatcggttggggatctgcatcaaatgcagggtcgggcagcggttttaacggaggc
tttggctcaagcatggattctaaatcttcgggctggggaatgtag

DBGET integrated database retrieval system