Pyramidobacter sp. YE332: RAH42_05430
Help
Entry
RAH42_05430 CDS
T09677
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pyy
Pyramidobacter sp. YE332
Pathway
pyy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pyy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RAH42_05430 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pyy03400
]
RAH42_05430 (nth)
Enzymes [BR:
pyy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
RAH42_05430 (nth)
DNA repair and recombination proteins [BR:
pyy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RAH42_05430 (nth)
Prokaryotic type
RAH42_05430 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
EndIII_4Fe-2S
HHH
DUF2400
Motif
Other DBs
NCBI-ProteinID:
WOL41083
UniProt:
A0AAU0KEC1
LinkDB
All DBs
Position
complement(1168626..1169330)
Genome browser
AA seq
234 aa
AA seq
DB search
MSRADVGKTVTPAPIAPPSITTVLEILEQLWKQGTDSAKIVYEEPLDGLIETVLSQNTND
RNRDMAFERLKSQYGSWERVAALPQDRIAEAIKPAGICNNKAATILRVLKTVKERFGEYS
LKRLKSGTPAAAWDFMTHIQGVGPKTAACVLAFDLGFPAFPVDTHVARISKRLGWADAKE
TPAEIQARLERLVPDEMKCAGHLNVIQHGKNICKARAPKCGECPLRGICPSSEA
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgagccgggctgacgtcggcaaaacggtgacgcccgctccgatcgctccgccgtcgatc
acgaccgtgctggaaatcctggaacaactctggaaacaggggacggactcggccaaaatc
gtctatgaagagccgctcgacgggctgatcgagacggtgctgtcgcaaaacaccaacgac
cgcaaccgcgacatggccttcgaacgcctgaaatctcaatacggaagctgggagcgcgtc
gccgcgctgccgcaggaccggatcgccgaggcgatcaagccggcgggaatctgcaacaac
aaggcggcgacgatcctgcgcgtgctgaaaaccgtgaaagagcgcttcggcgagtattcg
ctcaaacgcctgaaaagcggtacgcccgccgcggcctgggattttatgacgcacatccag
ggcgtcggcccgaaaacggccgcctgcgtgctcgctttcgatctcggttttccggccttt
cccgtggacacgcatgtggcgcgcatctcgaagcgtctcggctgggccgacgccaaagag
acgcctgcggagatccaggcccgcctcgaacggcttgtgcccgacgagatgaagtgcgcc
gggcacctgaacgtgatccagcacggaaaaaacatctgcaaggcccgagcgccgaagtgc
ggcgaatgtcccctcaggggcatctgtccttccagcgaagcctga
DBGET
integrated database retrieval system
