Pseudomonas ogarae SWRI108: HU749_023160
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Entry
HU749_023160 CDS
T07889
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pza
Pseudomonas ogarae SWRI108
Pathway
pza03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pza00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HU749_023160 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pza03400
]
HU749_023160 (nth)
Enzymes [BR:
pza01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HU749_023160 (nth)
DNA repair and recombination proteins [BR:
pza03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HU749_023160 (nth)
Prokaryotic type
HU749_023160 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Ogg-HhH
HHH_8
DprA_N
DUF2400
Motif
Other DBs
NCBI-ProteinID:
QXH93707
LinkDB
All DBs
Position
5265648..5266286
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AA seq
212 aa
AA seq
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MNAAKRLEIFRRFHEDNPEPKTELAYSSPFELLISVILSAQSTDVGVNKATARLYPVANT
PEAIHALGVEGLSEYIKTIGLFNSKAKNVIETCRLLIERHGSEVPQTREALEALPGVGRK
TANVVLNTAFRQLTMAVDTHIFRVSNRTGLAPGKNVVEVEKKLMKFVPKEFLLDSHHWLI
LHGRYVCLARKPRCGSCRIEDLCEYKHKTSDD
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgcaaaacgcctggaaatatttcgtcgctttcacgaagacaacccggaaccg
aaaaccgaactggcctattcctcgccgttcgagctgctgatctcggtcatcttgtcggct
caatccaccgacgtcggcgtcaacaaagccacggccagactgtacccggtggccaatacg
ccggaggcgatccatgccctgggcgtcgaggggctgtccgaatacatcaagaccatcggg
ctgttcaacagcaaggccaaaaacgtgatcgagacctgccgcctgctgatcgagcgccac
ggcagtgaggtcccgcagactcgcgaagcgctggaagcccttccgggcgtcggccgcaaa
accgccaacgtcgtgctcaataccgcgtttcggcagttgaccatggcggtcgacacccac
attttccgggtcagcaaccgcaccggactggcccccggcaaaaacgtggtggaggtcgag
aagaaattgatgaagttcgtccccaaggaattcctgctggactcccatcactggctcatc
cttcacggacgctacgtctgcctggcgcgcaagccccgctgcggcagctgccgaatcgaa
gatttatgcgaatacaagcacaagacctccgacgattga
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