Stutzerimonas zhaodongensis: KQ248_06720 Help Entry KQ248_06720       CDS       T09079                                  Symbol ligB Name (GenBank) NAD-dependent DNA ligase LigB   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism pzd  Stutzerimonas zhaodongensis Pathway pzd03030   DNA replication pzd03410   Base excision repair pzd03420   Nucleotide excision repair pzd03430   Mismatch repair Brite KEGG Orthology (KO) [BR:pzd00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     KQ248_06720 (ligB)    03410 Base excision repair     KQ248_06720 (ligB)    03420 Nucleotide excision repair     KQ248_06720 (ligB)    03430 Mismatch repair     KQ248_06720 (ligB)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:pzd03032]     KQ248_06720 (ligB)    03400 DNA repair and recombination proteins [BR:pzd03400]     KQ248_06720 (ligB) Enzymes [BR:pzd01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      KQ248_06720 (ligB) DNA replication proteins [BR:pzd03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      KQ248_06720 (ligB) DNA repair and recombination proteins [BR:pzd03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      KQ248_06720 (ligB)    NER (nucleotide excision repair)     GGR (global genome repair) factors      KQ248_06720 (ligB)    MMR (mismatch excision repair)     DNA ligase      KQ248_06720 (ligB)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       KQ248_06720 (ligB) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  OB_DNA_ligase DNA_ligase_aden HHH_5 RNA_ligase Motif Other DBs NCBI-ProteinID:  QWV18358 UniProt:  A0ABX8IZK6 LinkDB All DBs Position complement(1450210..1451883) Genome browser AA seq 557 aa AA seqDB search MQRLIATALCTLSCLAMADCPDWPNRRAETEIAALAAQVAQWDDAYHRRGLSLVDDEIYD QTRRRLEQWQACFATDSAATAADPLDGSDGPIAHPVAQTGLAKLADAEAVKDWLTARSDV WVQPKVDGVAVTLHYQQGSLVRVVSRGDGSHGQDWTDRARQLQAIQLQLPIKEELILQGE LYWRVQNHVQAQAGSAGARSKVTGAMARLVLDEATAAQIGLFIWDWPNGPSDMRSRLAGL VAMGFDESAALTVPLETAEQAGHWRDHWFRHSLPFASDGIVLRQGERPDATRWQAQPPHW AIAWKYPLRTAVTQVREVTFSIGRSGRITPVLQLEPVQLDDRLVSRVSLGSVRRWQQADV QPDDQVAIALAGLTIPRFERVVWRMQQRRRVEAPTPDDYHFMSCWHTAPGCDQQFVARLV WLSGKKGLDLPHLGPGTWQALVDARLVDGLLDWLHLDQRRLQQVPGIGEASASTLVASFQ LARARPLASWLRALGAPPGADAIPADSWDDLEAISLTQWQSEPGIGATRAKQLRTFFTAP EILRLRQQLHEVGIAGF NT seq 1674 nt NT seq  +upstreamnt  +downstreamnt atgcagcgcttgattgcgacagcactctgtaccctttcctgcctggcaatggccgattgc cctgactggccgaaccgccgcgctgaaacggagatcgcagccttggccgcccaggtggcg caatgggacgacgcctaccatcggcgcggtctctcgctggtcgacgacgaaatctacgac cagacccggcggcgtctggagcaatggcaagcctgctttgcgactgacagcgcagcaaca gctgcagacccgctcgacggcagcgacgggcccattgcccatccagtcgctcagaccggc ctggccaagctcgccgatgccgaggcggtcaaggactggctcacggcccgctcggatgtg tgggtccagcccaaagtcgatggcgtcgcggtaacgttgcattaccaacagggttcactg gtccgggtggtgagccgcggcgacggcagccatggacaggactggaccgaccgcgcccgg caactgcaggccatacagctgcagctgccgattaaagaagagttgatcctgcagggcgag ctctactggcgcgtgcagaaccacgtgcaagcgcaagccggcagtgccggggcgcgcagc aaggtcaccggagcgatggcgaggttggtgctggatgaggcgaccgccgcacagatcggc ttgttcatctgggactggcccaacggcccgtccgacatgcgatctcgcctcgccggcctg gtggcgatgggattcgatgaaagcgctgcactgaccgtgccgctggaaactgcggaacaa gctggccattggcgtgaccactggttccgccatagtcttccgttcgccagtgatgggatc gtgctgcgccagggtgagcgcccggacgccacccgctggcaggcccagccgccgcactgg gcaattgcctggaaatatccgctgcgcacagccgttacccaggtgcgcgaggtgacgttc agcatcggtcgcagcggcagaatcacaccggtactgcaactggagccggtacagctcgat gaccgccttgtcagccgcgtcagcctcgggtccgtgaggcgttggcagcaggcagacgta caacctgacgatcaggtcgcgatcgccctggccggcctgaccatcccacgcttcgagcgt gtcgtctggcgcatgcagcagcggcggcgagtcgaagcgcccacgccggacgactaccac ttcatgagttgctggcatacggcccccggctgtgatcagcagttcgtcgcacgcctcgtc tggctcagcggaaagaaagggctcgacctgccccacttggggccggggacttggcaggca ttggtggatgccaggctggtcgatggcctacttgactggctgcacctcgatcagcgtcgt ttgcaacaggtgccaggtatcggcgaagccagcgccagcacactggtcgccagtttccag ctggcacgcgcccgccctctcgccagttggctacgagcgctcggcgcgccaccgggtgca gatgcaataccggccgacagctgggacgacctagaggcaatctccctgacgcaatggcag tccgagcccggcatcggggcgacacgcgctaagcagcttcggaccttcttcacggcgccg gaaatccttcggctgcgtcagcaactgcatgaggtcggcatcgccggattctga

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