Qiania dongpingensis: H9Q78_13130
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Entry
H9Q78_13130 CDS
T08121
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
qdo
Qiania dongpingensis
Pathway
qdo03030
DNA replication
qdo03410
Base excision repair
qdo03420
Nucleotide excision repair
qdo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
qdo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H9Q78_13130 (ligA)
03410 Base excision repair
H9Q78_13130 (ligA)
03420 Nucleotide excision repair
H9Q78_13130 (ligA)
03430 Mismatch repair
H9Q78_13130 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
qdo03032
]
H9Q78_13130 (ligA)
03400 DNA repair and recombination proteins [BR:
qdo03400
]
H9Q78_13130 (ligA)
Enzymes [BR:
qdo01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
H9Q78_13130 (ligA)
DNA replication proteins [BR:
qdo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
H9Q78_13130 (ligA)
DNA repair and recombination proteins [BR:
qdo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
H9Q78_13130 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H9Q78_13130 (ligA)
MMR (mismatch excision repair)
DNA ligase
H9Q78_13130 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
H9Q78_13130 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
HHH
BRCT_2
Lar_restr_allev
RUBY_RBDX
Nlig-Ia
Anti-TRAP
DUF4796_N
Motif
Other DBs
NCBI-ProteinID:
QNM05361
UniProt:
A0A7G9G3H9
LinkDB
All DBs
Position
2804359..2806320
Genome browser
AA seq
653 aa
AA seq
DB search
MEKERQIARMKELVNLLREAGKAYYQESREIMSNYEYDARYDELVALEKETGITLSKSPT
RQVGYELLSELPKEAHESPMLSLDKTKDSGALAEWLGDKDGLLSWKLDGLTIVLTYRDGQ
LEKAVTRGNGEVGEVITNNARVFANVPLTIACRGEVVLRGEAVIKYSDFYKINEEIAEVD
AKYKNPRNLCSGTVRQLNNEITAKRNVNFFAFSLVKAEGVDFGNSRENQFLWLSEQGFDV
VEYRKVSRETVADTVADFAGRIGDNDFPSDGLVLIFDDIEYGRSLGRTAKFPRDSIAFKW
ADEIQPTHLSYIEWSASRTGLINPVAVFEPVELEGTTVSRASVHNLSIMEALELGVGDEI
TVYKANMIIPQIADNLTRSGSLEIPEVCPVCGGATEIRQENDVKSLYCTNPECQAKRIKR
FSLFVSRDAMNIEGLSEATLEKFVDAGFVREFADLFYLDRYREQIISMDGFGEKSYENLQ
SSLEKAKDTTMPRFVYGLGIANIGVANAKMLCKAFDYDFDRLRHADREELEQIDGIGPVI
ADGMVSYFQSEKNNEEADRMLSLVTFHDEVASAETQILAGKTFVITGSLERFGNRNEAKA
LIESLGGKVTGSVTARTDYLINNDSLSGSSKNKKAKELGIPIISEEEFLNMTE
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaggaaagacagatcgcacggatgaaggagctggtgaaccttttgagagaggcg
ggaaaagcctactatcaggagagccgggagatcatgagcaattatgagtatgacgcacgg
tacgatgagcttgtggctctggagaaggaaactgggattactttatccaagagtcctacc
agacaggtgggctatgaactgctgagtgagcttcccaaggaagcacacgagagcccgatg
ctgtctctggataagacaaaggattcgggagcgctggccgaatggctgggggataaggac
ggcctcctgtcctggaagctggacggactgaccattgtactgacctaccgggacgggcag
cttgaaaaagcagtcacccggggaaacggggaagtgggagaagtcatcacgaataatgcc
cgtgtgtttgccaatgtacccctcacgatcgcctgccgcggggaagtggtgcttcgcgga
gaggccgtgatcaaatattcggatttttataagataaatgaagagatcgcagaagtggat
gcgaaatataagaatccccggaacctctgcagcggaacggtccgccagctgaacaacgag
atcacagcgaagcggaatgtgaatttttttgcgttttctctggtaaaagcggagggcgtg
gattttggaaactccagggagaatcagttcctttggctttccgagcagggatttgatgtg
gtggagtatcggaaggtcagccgggaaactgtggcggatacagtcgcagattttgccggc
aggattggggacaacgacttcccgtccgatggcctggttctgatttttgatgatatagaa
tacggccgttctctgggccggaccgcgaaattcccccgggattccattgcgtttaagtgg
gcggacgagatacagcccactcatctttcgtatattgaatggagcgcttccaggactggg
ctgatcaatccggtagccgtatttgagccggtggaattggaggggactacagtcagcagg
gccagcgttcataatctgagcattatggaagccttggagctgggtgtcggggatgagatc
acggtctataaggccaacatgatcatccctcagatcgcggacaatctgacgcggagcgga
agcctggaaataccagaggtctgccccgtctgcggcggcgccacagagatacgacaggaa
aacgacgtgaaatcgctgtactgcacgaatccggagtgccaggcaaaacgaatcaagcgt
ttttcattgtttgtgagccgggacgccatgaatatcgaagggctgtccgaagcgactctg
gagaaatttgtggatgcgggtttcgtacgggaatttgcggatctattttacctggaccgc
taccgggagcagattatttccatggatggttttggagagaaatcctatgaaaatcttcag
tcatctttggaaaaagcgaaggacacgaccatgccccgctttgtctatgggctgggaatc
gccaatatcggagtggccaacgcaaagatgctctgcaaagcatttgattatgactttgac
aggctccgtcatgcggaccgggaggaactggagcagatagacggtatcggcccggtgatc
gccgacggcatggtatcttatttccagtcagagaagaataatgaggaggcagaccgaatg
ctttcgctggtgacatttcatgatgaagtggcatcagcggaaacacagatcctggccgga
aagacgtttgtcatcacagggtctttggaacggtttggaaaccggaacgaggcaaaggca
ctgatcgaatctctgggcggtaaagtgacgggttctgttacggccaggactgattacctc
ataaacaatgacagtttatcaggttcctcgaagaataaaaaagccaaggagcttggaatt
cccattatatcggaagaggaatttctgaatatgacagaatag
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integrated database retrieval system
