Quercus lobata (valley oak): 115952920
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Entry
115952920 CDS
T07350
Name
(RefSeq) uncharacterized protein LOC115952920
KO
K12865
polyglutamine-binding protein 1
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115952920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
qlo03041
]
115952920
Spliceosome [BR:
qlo03041
]
Complex B
Other components
Prp19 complex
115952920
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Motif
Pfam:
WW
CEP164_N
WW_USP8
WW_TCERG1
Hydrolase_2
Motif
Other DBs
NCBI-GeneID:
115952920
NCBI-ProteinID:
XP_030926135
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All DBs
Position
7:14055280..14070462
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AA seq
597 aa
AA seq
DB search
MDNAHDQPLPPGVQSLPNYSTNPAPYPPPQHFDYAARPQYHSSNTGNYVFPLPYSNSTFT
PATQSSYPHNGTSNGYAPQWSGHIPNNFHNGYASQLGSVQHGAYLIEQQPQNQTAVGEMP
LHKDNQKPQDMGHFDGNDQKNADSGYRESNSHFSHEEYKSAVDVPDASTSNLGLHVKNDS
EVETAAQDAVLREQEIVTQNVIQSQREARGAGGPPKDNTDIFSERHDPNALKEHLLKMTS
EHRAEMASKRGKATHHEEGNIEIGNGYGVPGGGAYYGAQKPNIDTPSKSKELPDYLKQKL
KARGILKDDTEKGSPKLETGSTQLVDDGKLPLGWVEAKDPASGALYYYNETTGKSQWERP
VGASAVTQHPSPSSLPESWVESLDETTGHKYYYNTRTHVSQWEHPDSSRQVASKDYDSML
PQSGADVNQGNRSSELEKCMGCGGWGVGLVQMWGYCNHCTRVLNLPQCQYLSTRSSDQQQ
TNNSEKPRSNWKPPMGKGSKRSGRKRAYADDDELDPMDPSSYSDAPRGGWVVGLKGVQPR
AADTTATGPLFQQRPYPSPGAVLRKNAEIASQTKKSSPHFAAISKKGDGSDGLGDAD
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggataatgctcatgatcagccgctccctccaggcgttcaatctttgccaaactattca
actaacccagctccttacccgccccctcaacattttgattacgccgcaagacctcagtat
cactctagcaacacgggaaattatgtctttccgcttccttattctaattcaacctttact
cctgctactcaaagctcatatccgcataatgggacatcaaatggttatgctcctcaatgg
tcaggtcacatcccaaataactttcataatggctatgcttctcaactgggttcagtacaa
catggtgcctacctcattgagcagcaaccgcaaaaccaaactgcagtcggggaaatgcct
ctgcataaggataaccagaaacctcaagatatggggcattttgatggaaatgatcagaag
aacgctgactcaggttatcgagaatctaattctcatttttcgcatgaagagtacaaaagt
gcagtagatgttcctgatgcatctactagcaacttgggacttcatgttaaaaatgacagt
gaggttgaaactgccgctcaggatgctgtgttgcgtgaacaggaaattgtcacccaaaat
gtcatacaaagtcaaagagaggcaagaggtgctggtggacctcctaaggataatacagat
attttctctgaacgtcatgatcccaatgctctgaaggaacatctactgaagatgacttca
gaacatcgtgctgaaatggcttcaaagcgggggaaggcaacccatcatgaagaaggtaac
atagaaattggaaatgggtatggtgtaccaggtggaggtgcttattatggtgctcaaaag
cctaatattgatacccccagtaagtcaaaagaattgcctgattaccttaagcagaagttg
aaagcaagaggtattcttaaggatgatacagaaaaaggctctcctaagttggagactggt
tcaactcaactagtggatgatggaaagctgcctcttggatgggtggaggcaaaagaccct
gctagtggtgctttatattattacaatgaaacgactgggaagagtcagtgggaaagacct
gttggagcatctgctgtcacacagcatccatcaccttcatctcttccagagagttgggtg
gagtctttggatgaaacaacaggccataaatattattacaatacgaggacccatgtgtcg
caatgggagcaccctgattcctcacggcaggttgcttcaaaagattatgacagcatgctc
ccccagagtggtgctgatgtgaatcagggcaatcgatcatctgagctagagaagtgcatg
ggatgtggtggctggggagtaggccttgtacagatgtggggttactgcaatcattgcaca
cgagttctcaatcttccacaatgccagtacttgtcaaccagatcaagtgaccagcagcag
accaacaattctgaaaaaccaaggtccaattggaagcctcctatgggaaaaggaagtaaa
agaagtggtaggaaacgtgcttatgctgatgatgatgagttggaccccatggacccaagc
tcttattcagatgctcctcgcggtggctgggttgtaggcctaaaaggagtgcagccacga
gcagctgatacaactgccacgggtcctctctttcaacagcgtccatacccatctccagga
gcagtcttacgaaaaaatgctgaaattgcttcacaaacgaagaaatccagccctcacttt
gcagctatatccaagaaaggggatggaagtgacggacttggtgatgctgattga
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