Quercus lobata (valley oak): 115953082
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Entry
115953082 CDS
T07350
Name
(RefSeq) protein SIEL isoform X1
KO
K13141
integrator complex subunit 4
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
qlo03041
]
115953082
Spliceosome [BR:
qlo03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
115953082
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Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Cnd1
PDS5
INTS4_8HBD
Motif
Other DBs
NCBI-GeneID:
115953082
NCBI-ProteinID:
XP_030926422
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Position
7:complement(33896213..33903109)
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AA seq
967 aa
AA seq
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MPYISVSVSIFKPKLHSLSLSLLMEELVPSSSEPLSPQTLASFRSFIINPSTPQSKISSI
FETLTRSLQLTPDSLVLNLLSELASRHSNLSHLVFDSVRSNALLSSESIRLAAESLDALA
SISNTDPTLSTAIDELDDRLFVSLCFGPSVSVRSWLLRNAERFRIGPYLLLTLFLGFTKD
PYPYVRKIALDGLVGVSKSGIIEDRSMINGCYCRAIELLGDMEDQVRSAAIRTVSAWGLI
LVASNLETKLYWSDDLFVKLCSMGRDMSMVVRVEAFDALGKINLVSEDILLQTLSKRVLA
ITKEKRSLGQCPAEQFEILASNVAGVLVHGLEDEFYEVRKSACHSLRTLTIISAEFAGEA
LNLLMDVLNDDSMFVRLEALETMLHMATCGHLKVQGTHMHMFLGTLLDSNTLIRSATRKI
LKLVKLPNIELFRLSFDSLIENLEKHPQDEADIFSVLFHTGCNHGKFVVSTINEASEEID
QASEGKLGFDSARVAALLVLAISAPLSHGEHVCSIPPRIFSYAVTLLGRISRALTDIMDQ
NALLAYLSQCSISTTFSATELNIRRGEPCLPVANIEIPNDTSNEIDGSTRTSSQQEKDGA
SKLQSWTMREPLELAAPLGEFQVEVRDEVMKPINLILAKVKDIWPSIHSGFTNEVLRTLR
NFKEELATFTSDSLGTIGAVAFTLQYLQVIKQLAKVWEHFLPAKKLCSSGLGELDLILGK
LDMRLRELRSRFTGLSMEQELQILELVLLTCTLRLCKVEICCHFATLKKLSTTVSRVESI
LKSANIEPTIFISEVGKLLCLNEMSSSEASCNPFMFKELLKHFSLSQFVLCGRLNQIKAE
LTIPDNDSENPLPFVSRLPVGIPCDITLHNTSNENKLWLRMSMDDESTQFVFLDLNLFGS
SDEVRKFTYVAPFYKTPNAISFTLRVCMGMECLFEDVLSVKKYGGPERELTYLCQEREVH
LSMISEH
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgccatatatttcagtttcagtttcaattttcaaaccaaaactccatagcctctctctc
tctctcttaatggaagaactcgtaccgagctcgtctgaacctctctctcctcaaacccta
gcttccttcagatccttcatcataaacccctccactcctcaatccaaaatctcctccatc
ttcgaaaccctaactcgctctctccaactcactcccgactcactcgttctcaacctcctc
tccgaactcgcttcccgccactccaacctctcgcacctcgtcttcgactcggtccgttcc
aacgcgctcctctcctctgagtcgattcgcctcgccgccgagtcacttgacgcgctcgcc
tcgatatcaaacaccgatccgacactgtccaccgccattgacgagctcgacgatcggcta
ttcgtttccctctgcttcggcccctccgtgtccgtacggtcgtggcttctcagaaatgca
gagaggttcagaattggtccgtatttgttgcttactctgtttctagggtttactaaggat
ccgtacccttacgtgaggaaaatcgctctggatggactcgtcggtgtgagcaagtccggt
ataatcgaagatcgcagtatgatcaacggttgttattgccgtgcaattgagcttctcggt
gatatggaggatcaagtgagatcagctgcgattcgtacggtcagtgcttggggtctgata
cttgtagcatccaacctagagacaaaactgtactggtcggatgacttatttgtcaagctc
tgttctatgggacgtgatatgagcatggtggtccgggttgaagcttttgatgcccttggg
aagataaatttggtatctgaggatattcttttgcaaaccttatctaagagagtcctagca
atcacaaaggaaaagagatcccttgggcagtgccctgccgaacaatttgaaatattggca
tccaatgtagctggagttttggtgcatgggcttgaggatgaattctatgaggttagaaag
tctgcctgtcattccttgcgcacacttaccatcatctctgctgagtttgctggtgaagca
ttaaacttgttaatggatgtactaaatgatgactcaatgtttgtccggttagaagctttg
gaaactatgctgcatatggcaacctgtggccatctaaaggtgcaaggaacacacatgcac
atgtttcttggcactctactggacagtaatacgctcataagatctgctactaggaaaata
cttaaactggtgaagctgccaaatatagaattgtttagattatcttttgatagcctcatt
gaaaatttggaaaaacatccacaggatgaagctgacatattctctgttttgtttcacact
ggttgtaatcatgggaaatttgttgtctccactatcaatgaggcttcggaggagatagat
caagcttctgaaggtaagttgggctttgatagcgcaagggtggctgcattactagttctg
gccatttcagctccactctcacatggagagcatgtttgcagtatcccacctagaatattt
tcttatgctgttacattgctaggaaggatctctcgtgctttaactgatattatggatcaa
aatgcccttttggcttacttgtctcaatgcagtatatcaacaacattctctgccacagag
ttaaacatcagaaggggggagccatgcttacctgtagctaatattgagattccaaatgac
actagcaatgagattgatggttctactaggacatcatcgcagcaagaaaaagatggggct
tccaaacttcagtcttggacaatgagggagccattggaattagcagctccactgggagaa
ttccaggtcgaggttcgtgatgaagtaatgaagcccataaatcttatccttgcaaaggtc
aaagatatttggccatcaatacattcagggttcaccaacgaagtactaaggactctgagg
aatttcaaggaagaattggcaacattcacctcagactcacttgggactattggtgctgta
gcatttacattacaatatctccaggtaattaagcagcttgcaaaggtatgggaacacttc
ctgcctgcaaaaaagctttgttcttctgggttgggagaactggaccttatattgggaaaa
ctagacatgaggcttagagaactgagaagtaggtttactgggttgtctatggaacaggag
ttgcaaatcttggagctggtacttctgacctgtactctcaggttgtgtaaagttgaaatc
tgctgccattttgctactttgaaaaagctatctactacagtgtcacgtgttgaatccatt
ctcaaatcagcaaatattgaaccaaccattttcattagtgaggttggaaaattgctctgc
ctaaatgaaatgtctagtagtgaagcttcctgcaatccatttatgttcaaggaattgctt
aaacatttctccctttcacagtttgtgctttgcggaagactaaatcagataaaggcagaa
ctgactattcctgataatgactctgaaaatcctcttccttttgtttcacgactacctgtt
ggtataccatgtgacattactcttcataatacatcaaatgagaataaattgtggctgaga
atgagtatggatgacgagtcaactcagtttgtctttttggatttgaacctctttggaagc
agtgatgaggtaaggaaattcacatatgttgcgcccttttacaaaacccccaatgcaatt
tctttcacgttgagggtctgtatgggtatggaatgcttgtttgaggatgttctgtctgtc
aaaaaatacgggggtccagaacgtgagctaacatatctttgccaagaaagggaagttcat
ctctccatgatcagtgaacactga
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