KEGG   Quercus lobata (valley oak): 115954455
Entry
115954455         CDS       T07350                                 
Name
(RefSeq) switch 2 isoform X1
  KO
K20098  DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
Organism
qlo  Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:qlo03400]
    115954455
DNA repair and recombination proteins [BR:qlo03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    115954455
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD HDA2-3 SWI2_SNF2 SLFN-g3_helicase ERCC3_RAD25_C
Other DBs
NCBI-GeneID: 115954455
NCBI-ProteinID: XP_030928169
LinkDB
Position
8:39598409..39607124
AA seq 875 aa
MSLHIFKETLKPCTKNPSSSLNSTSITQSFDPIIPRKPPKSTLSQQLLRLQDPEDLPQPQ
KPHCLPNQQPQGHSDEEEKEEAEEPDRFGRPTKLGQFQFEHTGPFEPLVLSSQGEIPVVQ
VPAAINCRLLEHQRVGVKFLYSLYKNNHGGILGDDMGLGKTIQTIAFLAAVYGKDREGVD
STIMDQVGKKGPVLIICPTSVIHNWEDEFSKWATFSVSIYHGANRDLIYDKLEAHAVEIL
ITSFDTYRIYGSILSEVKWEIVIVDEAHRLKNEKSKLYGACLEIKTPKRFGLTGTVMQNK
IMELFNLFDWVAPGSLGTREHFREFYDEPLKHGQRSTAPERFVRVADKRKQHLVAVLQKY
MLRRTKEETIGHLMMGKEDNVVFCAMSELQKRIYSRMLQLPDIQCLINKDLPCSCGSPLT
QVECCKRTVPNGVIWPYLHRDNPDGCDSCPFCLVLPCLVKLQQISNHLELIKPNHKDDPD
KQRKDAEFASAVFGPDIDLAGGNTQSESFMGLSDVKHCGKMRALEKLMLSWVSHGDKVLL
FSYSVRMLDILEKFLIRKGYCFSRLDGSTPTNLRQSLVDDFNSSPSKLVFLISTRAGGLG
LNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVVVFRLLAAGSLEELVYSRQVYKQ
QLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDKLFTSEIIELHENQGHKHG
DHLSTKKGLTELGNNFVSSKEVGVTFSSESETRVPSDSERVKRSKPVLEDMGIVYAHRNE
DIVNAGPGIQGKLDISIPQNDSHIPAARRSKPDGVSEKENVPSIKDRKSSQYSLIARFAG
MGEFEFSKWLLSATPLEREKVLRDYKKRKEKLPNG
NT seq 2628 nt   +upstreamnt  +downstreamnt
atgtcactgcacatcttcaaagaaaccctcaagccctgcaccaaaaacccatcttcgtcg
ttgaattccacatccataacccaaagctttgaccccataatccctagaaaacccccaaag
tccactctctctcaacagcttctgcgcctccaagacccagaggatctgccccaaccccaa
aaaccacattgcttacctaaccaacaacctcaaggtcatagtgatgaagaagaaaaggaa
gaggcagaagaaccagatagatttgggagacccaccaaattgggtcagtttcagtttgag
catacaggaccctttgagccattggttctgtcctcacagggtgaaattccagttgtacag
gttcccgcggctatcaactgtaggttgcttgaacatcagagagtaggcgtgaagttttta
tatagtttatacaagaacaaccatggaggcattcttggagatgacatgggacttggcaag
accattcaaacaattgccttcctggctgctgtatatggtaaagacagagaaggtgttgat
tcaacaataatggatcaggtaggcaaaaagggccccgtactaataatttgccccacttct
gttatccataattgggaggatgagttctctaagtgggcaacctttagtgtttctatttac
catggtgcaaaccgcgatctaatatacgacaagttagaagcacacgcagttgagatactt
attaccagttttgacacatacagaatttatggcagcatcttgtctgaggttaagtgggag
attgtaattgttgatgaggcacaccggcttaagaatgaaaagtcaaagctttatggagca
tgtttagaaattaaaaccccaaaacgttttggtctgacaggaactgtaatgcagaataaa
ataatggaattatttaatctcttcgactgggtcgcaccaggatccttgggaacaagggaa
catttccgggagttttatgatgagcccctcaagcatggtcagaggtcaactgctcctgag
agatttgttcgggttgctgacaagcgaaaacagcacctagtggcagttcttcagaaatat
atgttgagaaggacaaaggaggagactattggccatcttatgatgggaaaggaagataat
gttgtgttctgtgccatgagtgaattgcaaaaacggatttatagtagaatgttacaacta
ccagacatccagtgccttataaataaggacctgccatgtagctgcggaagccctcttact
caagttgaatgttgcaaaaggactgtaccaaatggagtaatttggccttatcttcacagg
gacaatcctgatggttgtgattcatgccccttttgccttgtccttccctgccttgttaag
ttgcaacagataagcaatcacctggagctgattaagcctaaccataaggatgatccagat
aaacaaagaaaagatgcagagtttgcctccgctgtctttggccctgatattgatttggcg
ggagggaacacccaaagtgagagtttcatgggcctaagtgatgtcaaacattgtggcaaa
atgcgagcactggaaaagctaatgctttcatgggtttcgcatggcgataaagttcttttg
ttcagttactctgtcaggatgctggacatactggaaaaatttcttatacgcaaaggatac
tgcttctcaaggcttgatggttccaccccaaccaacttacgccagtctctagttgatgac
ttcaattcaagtccaagcaaactagtgtttctcatatcaacccgagctggtgggcttgga
ttaaatcttgtcagtgcaaatcgcgttgtaatattcgatccaaactggaatcccgcccaa
gacttacaggcccaggacaggtcctttcgatttggacagaagcggcatgttgtggttttt
cgccttcttgcagctggttcccttgaggaacttgtttattcccgtcaagtgtataaacag
cagctatcaaatatagccgtttctggaaaattagaaaaacggtactttgaaggtgttcag
gattgcaaagaatttcaaggcgagctttttggaatctgcaatttatttcgtgatctatct
gataagctctttaccagcgaaatcatcgaattacatgaaaatcagggacacaaacatggg
gatcaccttagtacgaaaaaaggattaactgaacttggaaacaattttgtttcatccaag
gaagtgggcgttacattttcatctgagtctgaaaccagagtgcctagtgactctgagagg
gtaaaaagaagtaaaccagtgcttgaagacatgggcattgtatatgctcatcgtaatgaa
gacattgtcaatgctggacctgggattcaagggaagttggatataagcatccctcagaat
gatagccatatccctgcagcaaggaggagcaaaccagatggtgtaagtgagaaagaaaat
gttccttcaatcaaagaccggaagagtagccaatacagtctcattgctcggttcgcaggt
atgggagaatttgaatttagcaagtggttactttctgcaactcctttggagagggagaaa
gtgcttcgagactacaaaaagaggaaggagaagttacctaatggttga

DBGET integrated database retrieval system