Quercus lobata (valley oak): 115971878
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Entry
115971878 CDS
T07350
Name
(RefSeq) E3 ubiquitin-protein ligase MIEL1-like
KO
K10144
RING finger and CHY zinc finger domain-containing protein 1 [EC:
2.3.2.27
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115971878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
qlo04121
]
115971878
Enzymes [BR:
qlo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115971878
Ubiquitin system [BR:
qlo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115971878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zinc_ribbon_6
zf-CHY
zf-RING_2
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
115971878
NCBI-ProteinID:
XP_030947839
UniProt:
A0A7N2N2Z8
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All DBs
Position
12:24319824..24326399
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AA seq
273 aa
AA seq
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MEQQHQQDSALTPLTKPKDFGKSDYGCEHYKRRCKIRAPCCNQIFPCRHCHNEVTSNLSN
PKDHHELVRQDVKQVVCLICNTEQQVAQVCSNCGVNMGEYFCDVCKFYDDTDKGQFHCEE
CGICRVGGRDNFFHCKKCGSCYSVSLRDNHLCVENSMKNFCPVCYEYLFDSIKGTTIMKC
GHTMHMDCFHEMAGQNQYRCPICSKTVCEMSAYWRSLDEEIQATAMPEEYQNEVSILCND
CNNTSNVRYHILGHKCSHCNSYNTRRISTPDNQ
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggaacaacaacatcaacaagactctgctttaactcctcttaccaaaccgaaggacttt
ggaaaatccgattacgggtgtgagcactataagagacgatgcaagattcgagccccctgt
tgcaaccagatcttcccttgccgccactgccacaatgaagtcacgagcaacctgagcaac
ccaaaagatcatcatgagctggtcaggcaagatgttaagcaagttgtatgtttgatttgc
aatactgagcagcaggttgctcaggtttgttctaactgtggtgtcaacatgggagagtac
ttttgcgacgtttgcaaattctatgatgatactgataaggggcagtttcattgtgaagaa
tgtgggatttgtagagttggtggtcgtgataacttctttcactgtaagaagtgcggatct
tgctattcagtgagtctgcgtgataatcacttatgtgtggagaactccatgaagaatttc
tgccctgtttgctatgagtatctttttgactcaattaaaggcaccacaattatgaagtgt
ggacacacaatgcacatggactgctttcatgagatggcagggcagaatcagtatcgttgt
cctatctgctccaagacagtgtgtgagatgtctgcttactggagatcgttggatgaggag
atacaagctactgccatgcctgaggaataccagaatgaggtttcaattctttgcaatgat
tgcaacaatactagcaatgttcgctaccacattttagggcacaagtgcagccactgcaat
tcatacaacacccgcaggatttcaacaccagataatcaatga
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