Quercus lobata (valley oak): 115974499
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Entry
115974499 CDS
T07350
Name
(RefSeq) BRISC and BRCA1-A complex member 2 isoform X1
KO
K12173
BRCA1-A complex subunit BRE
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
115974499
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
qlo04121
]
115974499
03036 Chromosome and associated proteins [BR:
qlo03036
]
115974499
03400 DNA repair and recombination proteins [BR:
qlo03400
]
115974499
Ubiquitin system [BR:
qlo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
115974499
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
BRISC complex
115974499
Chromosome and associated proteins [BR:
qlo03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
115974499
DNA repair and recombination proteins [BR:
qlo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
115974499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE
Motif
Other DBs
NCBI-GeneID:
115974499
NCBI-ProteinID:
XP_030950752
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Position
2:complement(11679918..11686825)
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AA seq
396 aa
AA seq
DB search
MASDGVPPIIAAQLNYLLSHFPLSVKIEHLWSGSKFSTGVIDRFTIVIPYCLDFIKWDFI
YNSESPISAPDVIFGAEDENFLSFLARNDGVEGNANSAKNCLSDWNGKDPTRLMVLLQQL
RDQYMNYQRKRVDEVDDDRLKFEVSTIAFREDTFLLFWQWIQLFFSHGIEMHLSSGAEKP
EEVKFAVPLTEMNIDKMVHGCPWRHSPKIYLQVIYPVGRKYVSASSAPRLKLLSTSDLKS
IFSIEDFKLPPWLDGMCMAEYLPHLEESLEKQILEAVSLIDVRRRFIESLAPLFGRPLEA
DPIFCRKATFLAGSGAFTFLVHFSISTQFPKQQPGLMLQSSQHMNSHGVPAKSPLITEYP
WSPRWETSVMAEKIFEFLVDEALNFKRYCNEAQLQH
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgatggagttcctcctataatcgctgctcagctcaactaccttctctctcac
tttcccctcagtgttaagattgaacatttgtggtccggtagcaagttctccactggagtc
attgaccgcttcacaatagtcattccctattgccttgacttcataaaatgggattttata
tacaattcagaatcgccaatttctgcgccggatgttatatttggagccgaagatgaaaat
tttctttcatttctggcaaggaatgatggagttgaaggtaatgcaaattcggcgaagaat
tgtttatctgattggaatggcaaggaccctacgcggcttatggttcttcttcaacagctt
agggatcaatatatgaactatcagagaaagcgtgttgatgaagtcgatgatgataggttg
aaatttgaagttagcactattgcgtttagggaggatactttcttactattctggcagtgg
atccaactattttttagccatggaattgaaatgcatttgagttctggtgctgaaaagcca
gaggaggtgaagtttgcagtgcctcttacagaaatgaacattgataagatggtgcacggg
tgcccttggagacattcaccaaagatatacttgcaggttatctaccctgttgggagaaaa
tatgtatctgcttcttcagcacctcgtctgaaattactatctacctctgacttgaagtct
atcttttctattgaagatttcaaacttcctccatggttggatggaatgtgcatggcagaa
tatcttccccatctggaagaatctcttgagaaacagatcttggaggcagtttcacttatt
gatgttagaaggcgctttattgagtcattagcccctctgttcggaaggccgttagaagct
gatccgatcttttgcagaaaggcaacatttcttgctggctctggggcatttacattcctg
gttcacttcagcatttcaactcagtttccaaagcagcaaccaggtttgatgcttcaaagt
tctcagcatatgaactcccacggtgtaccagccaagtcacctcttattactgagtatcca
tggagtccaagatgggaaacatcagtaatggctgagaaaatctttgagtttttggtggat
gaggctttgaacttcaagaggtactgcaacgaggctcaactacaacactag
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