Quercus lobata (valley oak): 115976582
Help
Entry
115976582 CDS
T07350
Name
(RefSeq) nuclear pore complex protein GP210
KO
K14314
nuclear pore complex protein Nup210
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115976582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qlo03019
]
115976582
Messenger RNA biogenesis [BR:
qlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115976582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_GP210_15th
Ig_GP210_16th
RRM_1
Big_2
Ig_NUP210_1st
Ig_NUP210_7th
Ig_NUP210_5th
RRM_7
Ig_NUP210_2nd
Ig_NUP210_3rd
Ig_NUP210_16th
Ig_NUP210_15th
RRM_PARP14_3
Ig_NUP210_9th
Motif
Other DBs
NCBI-GeneID:
115976582
NCBI-ProteinID:
XP_030953795
LinkDB
All DBs
Position
2:complement(74430051..74463664)
Genome browser
AA seq
2306 aa
AA seq
DB search
MPCCGVDSMRSNMLYLTVLLTLLLVLDTTTSYSGSGPHIADVNLLLPPKMTHPVEYRLQG
SDGCFKWSWDHHDVLSVLPEYNSSNHCSTSARLRSIATYSGRKETAVYATDVRTGVVIRC
KVFIDNFSRIQIFHNSIKLDLDGLATLRVRAFDSEDNVFSSLVGLQFKWHQMPETDGLPH
HLVHVPLKDSPLSDCGGLCGDLDIQIQLEDSGVFSDLYVVKGVEIGQEIVSVHLLEPGLK
HMADRIVLTVAEAMSLEPPSPVFVLIGAAVRYRLKVIRENIPQVVILPSPHHRWSVSNSS
VAQVDSMMGLTKALDLGVATVVVEDTRVVGHVQVSSLNVVVPDSLSLYIASFSTSGDPLE
GVKTIPSVARWYVVSGRQYLIQMKVFSQGPDAQEIYITESDDVKLYDNQSEYWRTFLVPD
DIAVKHSWQTRILKATSQGLDKLMASLTYFTGHQETKEVLKVVQEVKVCNQVKFILDKRS
GITQSILLPWAPTVYQEVELKATGGCAKASSDYKWFSSDTATVSVSALGIVQAKKPGKAT
VKVISVFDALNYDEVVIEVSIPSSMAMLHSFPVETVVGSHLQAAVTMKASNGAYFYRCDA
FCSFIKWKAGSKSFNIVNATGEKPVLDMVENFELYASLNGPPCSWTRIYASGPGRAMLHA
TLSKDYHHVDNSLQGPIVLKASTRIAAYPPLIICQLGDGSQFGGYWFDLAQAEAQNLLEN
LDKFYLVPGTHLDIMLLGGPEKWDKGVDFIETVETLDEGHGPVQNGVLVNQLSGNNSSVY
RVLCQTLGNFKLVFKHGNLVGDDHPLPAIVEILSSLSCGYPSSIALIADEPVNERNVIQT
AIQADRSSGRIRVTPVTVANGRTVRIAAVGISNTGEPFANSSSLCLRWELSSCDGLAYWD
DAFDSVRSKCSWERFLVLQNESGLCIVRASVIGFSDTVIDHYSAQLLESSETVLTDAIKL
QLVSTISVYPEFNLLFFNPDAKVNLSIIGGSCFLEAVVNDSRVVEVVPPPLGLQCSQLML
SPKGLGTAFVTVRDIGLAPPITASAVVQVADIDWIRITSQEELCLMEGCSQTINLMAGIN
DGSTFDSSQYAYMNIHVHIEDHIVELVGIDDTSSPHGGHVKGPNFKIMGTSLGITTLYVS
ASQQSGHEILSQPIKVEVYAPPRIHPPNIFLAPGASYVLTVEGGPTIGVYVEYASMDEGI
ATIQKSSGRLSANSPGNTTVLASVFGKGDTVICQAYGSVKIGVPSVMTLNVQSDQLGVGR
EMPIYPVFPEGHLFSFYELCKNYQWTVEDEKVLGFLVSEHSHGEMYKSLVATSKEVQFTS
YLEERELGFIKVLYGRSAGRANVNVTFSCDFITPGSNSGSRFYSASVSLLVVADLPLALG
VPITWVLPPHYTTTSLLPSSSESYGQWDGQSRKGTIVYSLLRCFGEKNEAVQKDSISIHR
DRIKTTDSNNLACIQGKDRTTGRIEIASCVRVAEVAQIRITNKEFPFHVINLAVGADLKL
PISYSDTLGNPFYEAHNAVLFHAETNYPDIVLINNTHDDDGNIHLKALRHGRALIRVSMS
SSPLKSDYILISVGAHVHPQNPVLHKGSYLNFSIEGLNDQDSGKWFTANESVVSVDMTSG
IAEAVGEGSTQVIFEGSGLKLQTLVTVLTGDIVSVDAPKETLTNVPFPTKGYNFLVKFSN
AYGNNFGPLGNSEEVPYDCIVDPPFVGYAKPWVDLNTGSSYCLFFPYSPEHLVRSIPKSK
DMKPDISVSMSASIRGAKYASGSASGLFIGGFSVLETGKNLKQLNLTPGSNKTIITILGN
TDVEIHWHNQDQIMIIPIYREESGIGGRAQYEIKVLGTKSFEDKIIITLPANGQRVEIDV
AYQPVERAAASGTIINKTLWASVVGCFVLLVLTAAIFICYLDRPGRSQTSTAPAPAPATP
TVPAPMTPVRGSPAVLNEQSPQTPQPFVDYVRRTIDETPYYRQEGRRRKIFIGGLARETT
DAQFVKHFGKYGDIIDSVIMKDRKTGQPRGFGFVTYAEPSVVDKVIEDTHVINGKQVEIK
RTIPKGAIGSKDIRTKKIFVGGIPATVNEDEFRDFFAQFGEVKEHQIMRDHSTSRSRGFG
FISFDTEQAVDDLLSRGNRLELAGAQVEIKKAEPKKPNPPPAPSRRYNDSRPAFSGGFRD
SGYGGFGGSSFGGGSGGGYRSGGPYGGGRSSAYGGYGGSEFGGYGGYGVGGGMATYREEP
YLGYSSRYGGGGFSRGYDLGGSYGGPSESYGGYASGGSGAAGGGYGSSYDASLGGAYGGG
SASFYGSRGGYGGGAGSGSRYHPYSR
NT seq
6921 nt
NT seq
+upstream
nt +downstream
nt
atgccatgctgtggcgtagactcgatgcgctccaatatgttgtacctcacagtactactc
actcttcttctagtgttggacacaacgacgtcgtactcaggctcaggccctcacatcgcc
gatgtcaatttactcttacctcccaaaatgactcatcctgttgagtacaggcttcaagga
agcgatggctgcttcaaatggtcctgggatcatcatgatgttctgtcagtgttacctgag
tataattcgagcaatcactgctcgactagtgcgaggctgaggtcgattgctacttatagc
ggtcgaaaggagactgctgtttatgctactgatgttcgcacgggggtcgtgattcgttgc
aaagtttttattgacaatttctccagaattcagatatttcataattctatcaagcttgac
ttagatggactcgctactctccgtgtccgcgcctttgatagcgaagataatgtgttctcg
tcactagtgggcttacaattcaagtggcatcagatgcccgaaactgatggattgcctcat
caccttgtccatgttccgttgaaggattctccgctaagcgactgtggtggattgtgtggg
gacttagatatccaaatacaacttgaagatagtggtgtattttcagatttatatgttgta
aaaggagttgaaatcggccaggagattgtttctgtgcatttgcttgagcctggattaaag
catatggctgataggattgttctgactgtagcagaagccatgtcacttgaacctccctca
cctgtttttgtcctcattggtgctgctgttcgttataggcttaaagttatacgtgaaaat
attcctcaagtggtcattttaccatctccacatcatcgatggtctgtttcaaactcttca
gttgctcaagtggactctatgatgggattaacaaaagcactagacttaggggtagcaact
gttgtggttgaagatacaagggttgttggccatgtacaagtttcatcccttaatgttgtt
gtaccagattctttatcgttatatatagcatcattttctacctctggtgatcctttagaa
ggagtgaaaaccattccgtctgtggcacgttggtatgtcgtttctggccgtcaatatctc
atacaaatgaaggtcttctcacaagggcctgatgcacaagaaatttacattacagagagt
gatgatgttaagttgtacgataaccagtcagagtactggagaacttttttggtgcctgat
gatattgcagtaaaacatagctggcagactagaatcctgaaagcaacttcacagggactg
gataagttgatggcttctttgacatattttaccgggcatcaagaaacaaaggaggttctc
aaagttgtgcaagaagtcaaggtttgcaatcaagtgaaatttattttagacaaaagaagc
ggtatcacacaaagcattctccttccctgggccccaactgtttatcaggaggtggagcta
aaggccacaggaggctgtgcaaaggcttctagtgactacaaatggttttcttcagacaca
gctactgtatcggtatctgctttagggattgtccaggccaagaagcctggtaaagctact
gttaaagtgatatctgtttttgatgcattgaattatgatgaggtggtgattgaagtttcc
atcccctcatctatggctatgcttcatagcttccccgtagagactgttgtgggatcacat
cttcaagctgctgtaacaatgaaagcatcaaatggtgcctatttttataggtgtgatgct
ttttgctccttcattaagtggaaagctggaagcaagtctttcaatattgtcaatgcaaca
ggggagaaacctgtcttggacatggtagaaaattttgagctctatgcatcattaaatggt
cctccatgctcttggacccgtatatatgcttccggtcctggtcgagctatgttgcatgcc
actctatcaaaagattatcaccatgttgataactcattacaaggacctattgtcttaaaa
gcatctacacgtatcgcagcatacccaccacttatcatttgtcagttaggggatgggagc
cagtttggtggttattggtttgatttggctcaagctgaagctcaaaatctattggaaaat
ttggataaattttatcttgttcctggaacacatttagatatcatgcttcttggtggacct
gaaaagtgggataaaggtgttgacttcattgaaaccgttgaaactttggatgaagggcat
ggtcctgttcagaacggagttcttgtgaatcagctatctggcaacaatagtagtgtgtac
agagttttatgtcaaacgctaggaaactttaaacttgttttcaaacatggtaatttggtt
ggggatgaccatcctctgcctgcaatagtagaaattttgtcatcactttcatgtggctat
ccttcctcaattgcactaatagccgacgaacctgtaaatgagcgcaatgttatacaaact
gcaattcaagctgaccgcagctcaggacgaattcgagtcacccctgtgactgtggcaaat
ggacgcactgttcgaatagctgcagttggcataagtaacactggagaaccttttgcaaat
tcatcttctctttgtttgaggtgggaactaagcagttgtgatgggctagcctactgggat
gatgcttttgattcagttaggtcgaaatgcagttgggagaggtttttggtcttgcaaaat
gaatcaggactgtgcattgttcgtgctagtgtcattggtttcagcgataccgtcattgat
cattattctgctcaactgctagaaagttcagagactgttcttacagatgcaataaaatta
cagcttgtttctactattagtgtttacccagagttcaacttgctatttttcaatcctgat
gccaaggtaaatctgtcaattattggtggaagctgtttcttggaagcagttgtgaatgat
tctcgagtggtagaagttgttccacccccactgggtttacaatgctcacaattgatgttg
tctcctaaagggttgggtactgcatttgtgacagttcgtgatattggacttgctcctcca
attacagcttctgctgtggtccaagttgcagatatagactggattaggattacatcacaa
gaggagctttgccttatggaaggatgctcacaaaccattaacctaatggctgggattaat
gatggaagtacttttgactcttctcagtatgcttacatgaatattcatgtccatattgag
gatcacatagttgaactcgtaggcattgatgatacctcgagtcctcatggtggacacgtg
aaagggccgaactttaaaattatggggacaagtctgggaatcacaactctttatgtcagt
gcttcacagcaatctggacatgaaattttgagtcagccaataaaggtcgaagtttatgca
ccaccaagaattcaccctcctaatattttcctggcaccaggtgcatcatatgtgcttact
gttgaaggaggcccaactatcggagtgtatgttgagtatgctagtatggatgaggggatt
gcaacaattcagaaatcttcaggaagattgtctgcaaattcacctggcaatactactgtt
cttgcctcggtttttggcaaaggagatactgtaatttgtcaagcatatggcagtgtcaaa
ataggagttccatctgtgatgactttgaatgtacaaagtgatcaacttggcgttgggcgt
gagatgccaatatatcctgtgtttcctgagggacatttgttttctttttatgagctctgc
aaaaattatcagtggactgtagaagatgaaaaggtgttgggtttccttgtgtcagagcat
tcgcatggggaaatgtataaatccctggtggctacttcaaaagaagttcaattcactagt
tatttggaagagagagaacttggttttatcaaggttttgtatggaagatctgcaggcagg
gcaaatgtcaatgtcacattctcatgtgattttataactcctggttctaactcagggtca
aggttttacagtgcatcagtatcattattggtggtggcagatctccctcttgctcttgga
gttcccataacctgggttcttcctccccattatactacaacaagtttattgccttcatct
tcagaatcgtatggtcagtgggatggtcaaagtcggaaaggaactattgtatattcatta
ttaagatgttttggtgagaagaatgaagctgtgcagaaagattctatttccattcacagg
gataggataaagacaacagacagcaacaatcttgcatgcattcaaggaaaagatcgtaca
acaggaagaattgagattgcctcttgtgttcgggtcgctgaggtggctcaaataaggata
acaaataaggagttcccatttcatgtaatcaatcttgctgttggtgctgatctaaaactg
ccaataagctattctgatactctaggaaatcctttttatgaagcacacaatgcagttctt
ttccatgctgaaactaactatcctgatattgtcctcataaacaacacacatgatgacgat
ggaaatattcatctcaaggcattacgacatggaagagctctcatacgagtatcaatgagt
agttcaccattgaagtcagactatattctgatttcagttggtgctcatgtacaccctcaa
aatccagtcttacacaaaggaagttatctgaacttcagtatagaaggtttaaatgatcaa
gattctggcaagtggtttactgccaacgaaagtgttgtatctgtggacatgacatctgga
atagctgaagcagttggggaaggttcaacccaagttattttcgagggttctggtctgaaa
ctgcaaacactggttacggtactcacgggggatattgtttctgtggatgctccaaaagag
acgctgacaaatgttccttttcctacaaaaggatataacttcttggtgaagttcagtaat
gcttatggcaacaactttggacctcttggaaacagtgaggaagtcccatatgactgtatt
gtggaccctccttttgttgggtatgcaaagccatgggtggatcttaacactggcagctca
tattgcctctttttcccttactcaccagagcacttggtacgctctatacccaagtcaaag
gacatgaaaccagatatatctgtttccatgagtgcatcaattagaggagctaaatatgcc
tcgggatctgcatctggtctttttattggagggttttcggtattagaaacgggcaagaat
ttaaagcagttgaatctgacaccaggctctaacaagacaatcataaccatcttggggaat
acagatgtcgaaatccattggcacaatcaggatcagatcatgatcatccccatctataga
gaagaatctggaattggtgggcgggcacagtatgagatcaaagtgctaggaacaaaaagt
tttgaagacaaaatcatcatcacgctcccagctaatggtcagagagtggaaatagatgtt
gcctaccaacctgtagaaagagcagcggcatcaggaactatcataaataaaaccctttgg
gcaagtgtggttgggtgctttgtgctattggtattgacagcggccatcttcatctgttac
ttggacaggcctggcagatctcagacatccactgctcctgctcctgctcctgctactccc
actgtcccagcacccatgacccctgttcgtggcagccctgctgttttgaacgaacagtct
cctcaaacacctcagccttttgttgactatgtaagaagaacaatagatgaaactccatac
tacaggcaagagggaaggaggagaaaaatctttatagggggcttagcgcgagagacaact
gatgcacaatttgtcaagcacttcggtaaatatggtgatattattgattctgtgataatg
aaggaccggaagactgggcagccccgaggatttgggtttgtgacttatgcagaaccctct
gtggttgataaagtcattgaggatacccatgttattaatgggaaacaagtggaaattaag
cggactatccctaagggagctattgggtctaaggatatcaggactaagaagatttttgtg
ggtggaattcctgcaactgtgaatgaagatgagttcagggacttctttgcacaatttgga
gaggtcaaggaacaccagatcatgcgggaccattccaccagtcgttctcgtgggtttggg
tttatttcctttgatacagagcaagcagttgatgatctcttgtccaggggtaacagactg
gagctggcaggagctcaggtggaaataaaaaaggccgagccaaagaagccaaacccacca
cctgccccatccaggcgttataatgattctaggcccgcatttagtggtgggttcagagat
agtggttatggtggattcggaggcagtagctttggaggtggcagtggtggtggatatagg
tcaggtggaccctatggtggtggcaggagcagcgcttatggtggttatggtggaagtgaa
tttggtggttatggaggatatggtgttggtggtggtatggcaacttacagggaagagccc
tatctaggatactcgagtcgttatggaggaggaggctttagcagaggttatgatctagga
ggcagttatggtggacctagtgagagttatgggggatatgctagtggtggtagtggtgct
gctggtggcggctatgggagtagttatgatgccagtcttggtggtgcctatggagggggt
agtgcctccttctatgggagtagaggggggtatggtggtggtgcagggagtggtagtcga
taccatccttattcaaggtag
DBGET
integrated database retrieval system
