KEGG   Quercus lobata (valley oak): 115977650
Entry
115977650         CDS       T07350                                 
Name
(RefSeq) survival of motor neuron-related-splicing factor 30 isoform X1
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
qlo  Quercus lobata (valley oak)
Pathway
qlo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115977650
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:qlo03041]
    115977650
Spliceosome [BR:qlo03041]
 Complex A
  U2 snRNP components
   U2 related factors
    115977650
 Complex B
    115977650
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    115977650
SSDB
Motif
Pfam: SMN_Tudor Agenet CENP-C_mid TUDOR CHASE3
Other DBs
NCBI-GeneID: 115977650
NCBI-ProteinID: XP_030955513
UniProt: A0A7N2R0H5
LinkDB
Position
2:103355819..103362763
AA seq 296 aa
MQGEEVSIEELASNLATYKDQLHQVRELLVDDPGNSEYVDMERELKEVIALTEELLATAK
QNDISGSDIGTSGRASPSLPHSKMDSESMLDHQGKFPIGTKVQAVWSEDGEWYDATIEAY
SPNGYFVSYDGWGNKEEVDPDNVRPIQEGVVNTLAEAERVAEATKQAIKRKIALAASMDF
QSRSLPAKLRIEPDDPEDVKVAKRKKIHAFKSKVRMEQLEVTQNKRQNAWQQFQTTKGKT
KKIGFFSGRKRESIFKSPEDPQGKVGVTGSGKGLTEFQKREKHLHLKGATVDGADE
NT seq 891 nt   +upstreamnt  +downstreamnt
atgcaaggagaagaggtaagcatagaagagctagcctcaaatcttgccacctacaaagat
cagcttcatcaggtcagagagcttttggttgatgatcctggaaactctgaatatgtagac
atggaaagggagcttaaagaggtgattgctttgacggaagaacttcttgcaactgcaaag
caaaatgatatttcaggatcagatattgggactagcggtagggcatctccaagtttgccc
cattccaaaatggactcagaaagcatgttggatcatcaaggaaagtttcccattggcaca
aaagttcaagctgtttggagtgaagatggggaatggtatgatgcaacaattgaggcgtat
tctccaaatggctatttcgttagttatgatggatgggggaataaagaagaggtggatcct
gacaatgtaaggccaattcaagaaggagttgtcaatactttggcagaagctgagagagtg
gctgaagctaccaagcaagctataaaacgtaagattgcactggctgcttccatggacttc
cagtcgcggagtttacccgcaaagcttcgaatagagcctgatgacccagaggatgtgaaa
gttgccaagcgtaagaagatacatgcttttaagtcaaaggtgcggatggagcaacttgaa
gtcacacagaataagcggcagaatgcttggcagcagttccagacaaccaaaggcaagact
aagaagattggtttcttttcggggcgcaagcgggaaagcatcttcaagtctccagaagac
ccacaaggcaaggttggtgtgacaggaagtggaaagggtttgaccgagttccaaaaaagg
gaaaaacacttgcatctcaagggagcgaccgttgatggtgcggatgaatag

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