Quercus lobata (valley oak): 115994790
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Entry
115994790 CDS
T07350
Name
(RefSeq) isoleucine--tRNA ligase, chloroplastic/mitochondrial isoform X1
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
115994790
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
qlo01007
]
115994790
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
qlo03016
]
115994790
Enzymes [BR:
qlo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
115994790
Amino acid related enzymes [BR:
qlo01007
]
Aminoacyl-tRNA synthetase
Class I (U)
115994790
Transfer RNA biogenesis [BR:
qlo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
115994790
Prokaryotic type
Other AARSs
115994790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
zf-FPG_IleRS
tRNA-synt_1_2
tRNA-synt_1e
DUF7685
Motif
Other DBs
NCBI-GeneID:
115994790
NCBI-ProteinID:
XP_030974913
LinkDB
All DBs
Position
6:complement(8933415..8956442)
Genome browser
AA seq
1074 aa
AA seq
DB search
MAFVQTSPYKVLSQRTCSSFRKSTSIKLFYFRGSPSAKAFSLLNLTHYTTGSGEFCSSSK
RRSRGPVMAAKKTSEGAKQEDGKYKHTVDLPKTAFGMRANSLVREPEIQKIWDDNQVYKR
VVERNNRGNFILHDGPPYANGDLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLP
IELKVLQSLDQDARKDLSPLKLRAKAAKFAKQTVQNQMASFKRFGVWADWNNPYLTLDPE
YEAAQIEVFGQMAIQGYIYRGRKPVHWSPSSRTALAEAELEYPEGHVSRSIYAIFKIVDT
PPTSSGLLKDFFPDLCLAIWTTTPWTIPANAAVAVNAKLQYAIVEVQSLSGDVSLSAGNK
KQRLGNILKESKKPFLIVASDLVPTLEAKWGVKLIIKKILSGSDLENCRYIHPIDNRECP
VVIGGDYITTESGTGLVHTAPGHGQEDYVTGLKYGLPILSPVGDDGKFTEEAGQFSGLDV
LGDGNIAVVNCLDEHLSIIMEESYEHKYPYDWRTKKPTIFRATEQWFASVEGFREATMNA
ISDVKWIPPQSENRISAMTSSRSDWCISRQRTWGLPIPAFYHVQSKEPLMNEETINHIKT
IIAQKGSDAWWYMTVEDLLPERYREKASDYEKGTDTMDVWFDSGSSWAAVLGKRNGLSFP
ADLYLEGTDQHRGWFQSSLLTSIATKGKAPYSSVVTHGFVLDEKGLKMSKSLGNVVDPRT
VIEGGKNTKEAPGYGADVLRLWVSSVDYTGDVLIGPQVLRQMSDIYRKLRGTLRYLLANL
HDWKADYTVSYHTLPMIDQHALFQLENVIMNIRENYEKYQFFKIFQIIQRFVIVDLSNFY
FDVAKDRLYVGGTTSFTRRSCQTVLAAHLLSIARAIAPILPHLAEDVWQNLPFQYTMEDG
SIAEFVFESRWPTLNETWLAFPTKETDFWEKILELRTEVNRVLEIARTEKLIGSSLDAKV
YLQTSDASLASRLCEMCAASNDVDTLHRIFITSQAEVLPSLEDEMISHIPFSGECLIQGK
SKVWIGVSRAEGLKCERCWNFSPQVGSFSEHPTLCNRCYNVVDAQPLPAVAMTS
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atggctttcgtccaaacctctccgtataaggttttatcgcaaagaacttgctcatctttt
aggaaaagcacttccattaagttgttttatttcagaggaagcccttcggccaaagcgttc
tctctcttaaacctgacacactatactactggttctggtgaattttgttcttcctcaaag
cgaagatctagaggacctgtaatggcagcaaagaaaacttctgaaggggcaaagcaagaa
gatggcaaatacaagcacacagttgatttgcccaagacagcgtttggcatgagagcaaac
tcattggtcagggagcctgaaattcagaaaatatgggatgacaatcaggtctacaagaga
gttgttgaaagaaataataggggaaattttattcttcatgatggtcctccatatgccaat
ggcgatcttcacatggggcacgcgttaaataagattttgaaggatataatcaatcgttat
aagcttcttcaaaactacaaagttcgttatgtgccagggtgggattgtcatgggctacct
attgaattgaaagttctgcagtcactggatcaagatgccagaaaggatctctcaccatta
aaattgagagcaaaggcggctaaatttgccaaacaaactgtgcaaaatcagatggcatca
tttaagcggtttggagtatgggcagactggaataatccctatctaacgctcgatccagaa
tatgaagctgcccagattgaagtgtttggccagatggccattcaaggttatatctacaga
ggcaggaaacccgttcactggagtccctcgtcacgaactgctcttgcagaagctgaattg
gagtatcctgaggggcatgtttcaagaagcatatacgccattttcaaaatagtggacaca
cctcctacttcaagtggccttttaaaggattttttcccagatttgtgcttggcaatatgg
actacaactccctggactattccggccaatgctgcggttgcagtgaatgccaagcttcaa
tatgccatagttgaagtacagtcactctcaggagatgtttctttatctgctggaaataaa
aaacaaaggcttggaaatattcttaaggagtcaaagaagccttttcttattgtagcatca
gatcttgtgccgacattagaagcaaaatggggagtgaagcttatcattaagaaaatacta
tcgggttcagatcttgaaaattgcaggtatatccatccaatagataacagagaatgtcca
gttgtgattggaggagattatattacaacagagtcaggaactggactggtacatactgct
cctggacatggtcaggaggattatgtgactggcctgaagtatggactgcctatactttct
cctgttggtgatgatggaaagtttactgaagaagctggacagtttagtgggcttgatgta
cttggggatggtaatattgctgttgtgaattgcttggatgaacatttgtccattatcatg
gaagaatcatatgaacataagtatccttatgattggcgaaccaaaaaacctactatattc
agggcaacggagcagtggtttgcatcagtggaagggtttcgcgaggctactatgaatgca
attagtgatgtaaaatggattcctcctcagtcagaaaacagaatttctgcaatgacttct
agccgctctgattggtgtatttcgcgacaaaggacatggggcttgcctattccagccttt
tatcatgtgcagtcaaaggaacctcttatgaatgaagagactatcaatcatatcaagact
ataatagctcaaaagggtagtgacgcatggtggtacatgacagtagaggatcttctccca
gaaaggtatcgtgaaaaagcatctgattatgaaaaggggactgacactatggatgtatgg
ttcgattcaggctcttcttgggcagcggtcttgggtaaaagaaatggccttagttttcct
gcggacttgtaccttgaaggtactgaccagcatcgtgggtggttccaaagttctctatta
acaagtattgctacaaaagggaaagctccatattccagtgttgtaacacatggatttgta
ttggatgagaagggtttaaagatgagcaaatctttgggtaatgttgtagatccacgcact
gtgatcgaaggaggaaaaaatacaaaggaagcacctggctatggagctgatgtcttgcga
ctttgggtttctagtgtagattatacaggtgatgtattgatcggccctcaagtcctccgc
caaatgtctgacatttatagaaagctgcgtggaacattgagataccttttggcgaatctg
catgactggaaagctgactatactgtttcataccacacccttcccatgattgatcagcac
gcactgtttcagctcgaaaatgttataatgaacattagagagaactatgaaaaatatcaa
ttctttaaaatatttcagatcatacaacggtttgtcattgttgacctatcaaatttctat
tttgatgttgcaaaagatcgactttatgttgggggcacaacaagttttacaaggagaagt
tgtcaaacagttcttgcagcacatctgctttccattgcgagagcaattgctccaatatta
ccccatttggctgaggatgtatggcaaaacctcccctttcagtataccatggaagatggt
tcgattgctgaatttgttttcgaatcaagatggccaaccctcaatgaaacttggcttgct
tttcctaccaaagaaactgatttctgggaaaaaattcttgagctgagaactgaggtgaat
agagtcctggagattgcacgtactgagaaactgattggttccagtttagatgcaaaggtt
taccttcagacttctgatgccagcctggcatctagattgtgtgagatgtgtgcagcaagc
aacgatgtagacacattgcatcgcatattcatcacatctcaggcagaggttcttccctct
ttagaagatgagatgatttcccacataccattcagtggagagtgtctcattcaaggaaag
agcaaggtttggattggtgtgtctcgtgctgagggtttaaagtgtgaaagatgctggaat
ttttcaccccaagttggttctttttcggagcatcccaccctttgcaaccgctgctataat
gtggttgatgctcaaccacttccagctgttgcaatgacaagctga
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