Quillaja saponaria (soapbark tree): O6P43_002803
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Entry
O6P43_002803 CDS
T09778
Name
(GenBank) DNA ligase
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
O6P43_002803
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
qsa03400
]
O6P43_002803
Enzymes [BR:
qsa01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
O6P43_002803
DNA repair and recombination proteins [BR:
qsa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
O6P43_002803
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
DNA_ligase_IV
BRCT
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
KAJ7979399
UniProt:
A0AAD7QDA0
LinkDB
All DBs
Position
2
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AA seq
1174 aa
AA seq
DB search
MAEQTKFSVLCSLFTWIQRSKSSAKKRSKFRKFIDTFCKSDDYFSGIRLILPNLDRERGT
YGLKESVLATTLIDALSMSRESEDALRLINWRKGGAKAGANAGNFALVAAEVLQRRQGLA
SGGLTIKELNDLLDQLASSENRAEKILVLSTLIKKTNAQEMKWIVMIILKDLKLGISEKS
IFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRVADATAAWK
RLHGKEVVVECKFDGDRIQIHKNKTEIHFFSRSFLDHSEYGPGMSDIIVQNILVDRCILD
GEMLVWDKSLNRFAEFGSNQEIAKAAKDGLDSDRQLCYVAFDILYVGDTSVIHQSLKERH
ELLHKVVKPLKGRLEILVPNGGLNAHCPPGEPCRSLIAHNVDDVERFFKETIENRDEGIV
LKDLGSKWEPSDRSGKWLKLKPDYIRAGSDLDVLIIGGYYGSGRRGGEVAQFLVGLAETP
SPNTYPRRFISFCRVGTGLSDDELDALVTKLKPYFRKYDYPKKAPPSFYRVTNNSKERPD
VWVDNPQKSIILSITCDIRTINSEVFAAPYSLRFPRIDRVRYDKLWHECLDVQSFVELVQ
SSNGTTQRGMDYSSVQDGKPKRLKSSKRGDKRNISVVPSHLIQTDVSNVKGDSLMFTNMM
FFTHCIAADSKGFKFEAAKRHGDIIHYSWILDCCSQKKLVHLQPKYFLFLSELTKRRLRE
EIDEFSDSFYCDLDLTDLKQLLSNLSLSEDLITINYYKKKYCPKDKWSNFHGCCIYFHPS
IPFPVRFVNFYFTSLKGDQDVLLGLVQRRLKLEVIMGGGRVSDSIAYATHVVVVSVPGHS
VDSENILTSFPSMEKHFQSEQEVACCWISVANTEECKHDMAIEAPSGEDNTGDENMSPFL
DKESKQTRVKAVDNRTVLASPERGGYKRRRGRPAGRGMKKAKTGSNQAQRARARIDKKPA
KIREYETDEGDSYDEKSYKGDINLREGRYEKHPETQGTEIVEDFESSERGKEAQPAATVD
DHNYSVLASSERAYKKRGRLSSRGEANLRQGTYETSPETQETTRVEDSDLSVTGKEAQQE
VLDDIGHGNEYVPEIEVTERHNSQTSEKKDKLEIMADPVQAMLFDMIPSLGIKKVEQIVE
HNHKDEKPLKNPNEQPIKKKKVSYRDIAGELLKD
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcagaccaagtttagcgttctatgcagcctcttcacatggatacagcgaagc
aagtcgtcagcaaaaaagcgttccaagttccggaaattcatcgacaccttctgtaaatcc
gatgattacttcagcggaattcgcttaattcttccaaatctcgatagagagcgaggcacc
tatgggctcaaggagtcagtacttgctaccaccctaattgacgcccttagcatgtcccgg
gagtccgaggatgctcttcgcctcattaattggaggaaaggtggtgcaaaggctggcgcc
aatgccgggaattttgcacttgttgcggcggaggtgctgcagcgtagacagggtttggca
tcgggcggactaacaatcaaggagttgaatgacttgcttgatcaattggcttcaagtgaa
aatagggcagagaagattttggttctttctacccttatcaagaagacaaacgcgcaggaa
atgaaatggattgtcatgattattctcaaagatttaaaactgggaataagtgaaaagagc
atttttcacgaatttcatccagatgctgaagacttatttaacgtcacttgtgacttgaaa
ttagtttgtgaaaaactgaaggatcgaaaccaacggcataaacgccaggacattgaagtt
ggaaaagctgtgcgccctcaactagctatgagagttgctgatgctacagctgcatggaaa
aggcttcatgggaaggaagtggttgtcgagtgcaaatttgatggtgatcgaatccaaatt
cataaaaataaaacagagatacattttttctcaaggagctttcttgatcactctgagtat
ggacctggaatgtcagacattatagtacaaaatattctggttgataggtgtatacttgat
ggtgaaatgcttgtctgggacaaatctttaaaccgttttgctgagtttggttcaaatcag
gaaatagccaaggcagccaaggatggacttgacagtgatcggcagttgtgctatgttgca
tttgacatcctttatgttggagatactagtgtaattcaccaaagcttaaaggaacgacat
gagcttctccacaaagttgtgaagcctttgaaaggtcgattggaaatcttagtacctaat
ggtggtcttaatgctcattgtcctcctggggaaccatgtcggtcacttatagctcataac
gtggatgatgttgagagattcttcaaagaaactattgagaatagggatgaagggattgtt
ctaaaggaccttggttccaaatgggaacctagtgatcgtagtggaaagtggctgaaattg
aagcctgattatattcgtgctggttctgatctggatgtacttatcattggaggctactat
ggctctggacgtcgtggaggggaggttgctcaattcttggtgggacttgccgagactcct
tccccaaatacatatcccaggcgatttatctccttttgcagagttggtactggactttct
gatgatgaacttgatgctttagtaaccaaattgaagccttactttagaaagtatgactac
ccaaagaaggcaccaccgagtttctatcgagtaacaaataattcaaaggagaggcctgat
gtgtgggttgataatcctcagaaatcgattattctctctataacatgtgatatacgaact
ataaactctgaggtatttgctgcaccatacagcctgagatttccacgtattgaccgagtg
agatatgataagctttggcatgaatgcctagatgtccagtcttttgtagagctggttcaa
tccagcaatggtactacccagagaggaatggattacagcagtgtgcaagacggcaaacca
aaacgattgaaatcctctaagagaggggataaaaggaacatatctgttgttccttcacat
ttaattcagactgatgtttccaatgtcaagggggactccttaatgtttacaaatatgatg
ttcttcactcactgtatcgcagcagatagcaaagggtttaaatttgaagcagcaaaacgc
catggtgatatcattcattactcttggattctagattgttgctcacaaaagaagcttgtt
cacttacagccaaagtacttcctcttcctctctgagttgacaaagaggagattaagagaa
gaaattgatgagttttcagactcattctactgtgatcttgaccttacagatctgaagcag
ctcttaagtaatttgagtttatcggaagatttgatcactatcaactattacaagaaaaaa
tactgcccgaaggacaagtggtctaactttcacggttgctgcatttacttccatccttca
ataccatttcctgtaagatttgtcaacttttactttacatctttgaaaggagatcaggat
gttctgttaggacttgtacagaggagattgaagctggaagttatcatgggtggtggcaga
gttagtgacagcattgcatatgctacccatgtggtggtggtgtcagtaccagggcatagt
gtggactccgaaaatatactgacaagtttcccttcaatggaaaagcattttcagtcggag
caagaggttgcatgttgttggatctcagtggcaaatactgaagagtgtaaacatgacatg
gctatagaggccccttctggtgaggacaatacaggggatgagaacatgtcacctttcctc
gataaggaaagcaaacagaccagagtaaaagctgttgacaaccgcacagtcttggcatct
cctgagaggggtggttacaaaaggagaagaggaagacctgctggtagaggcatgaaaaaa
gcaaaaactggttccaaccaagctcaaagagcacgggcacgtattgataagaagcctgct
aagatacgtgaatatgaaacagatgaaggtgattcttatgatgaaaaatcttataaagga
gatatcaacttgagagaaggaagatatgaaaaacatccagaaacccaagggactgaaata
gtagaagattttgaatcttcagaaagaggcaaggaagctcagccagcagctactgttgat
gaccacaactactcagtcttggcatcttccgagagagcttacaaaaaaagaggaagactt
tctagcagaggagaggccaacctgagacaaggaacctatgaaacatctccagaaacccaa
gagactacgagagtagaagattctgatttatccgtgacaggcaaggaagctcagcaagag
gttctagatgatattggacatggaaacgagtatgtccctgaaattgaagtgactgaaagg
cacaatagccaaaccagcgagaagaaagataaactggaaattatggctgatccagttcag
gccatgttatttgacatgattcctagccttggaattaagaaagtcgagcaaatagtggag
cataatcataaagatgagaagccactaaaaaatcccaatgaacagcctataaagaaaaag
aaagtcagctacagggatattgctggtgagctgctcaaggattga
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