Quillaja saponaria (soapbark tree): O6P43_007603
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Entry
O6P43_007603 CDS
T09778
Name
(GenBank) 5'-3' exoribonuclease
KO
K20553
5'-3' exoribonuclease 4 [EC:3.1.13.-]
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
O6P43_007603
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsa03019
]
O6P43_007603
Messenger RNA biogenesis [BR:
qsa03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
O6P43_007603
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GFIT
Motif
Pfam:
XRN_M
XRN_N
Motif
Other DBs
NCBI-ProteinID:
KAJ7978076
UniProt:
A0AAD7QBY1
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Position
3
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AA seq
919 aa
AA seq
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MGVPAFYRWLADRYPQSIADVVEEEAAAGENCVLLPVDVSKPNPNGMEFDNLYLDMNGII
HPCFHPEGKPAPANYDDVFKSIFDYIDHLFLLVRPRKLLYLAIDGVAPRAKMNQQRSRRF
RAAKDAADAEAEEERLREEFEAEGKYLTPKERPETSDSNVITPGTQFMVVLSVALQYYIQ
TRLNHNPGWQNTKVILSDSNVPGEGEHKIMQYIRSQRNLPGFNPNTRHCLYGLDADLIML
SLATHEVHFSILREVITLPGQQDKCFVCGQKKYQFLNIWVLREYLQYDLEIPNPPYEIDF
ERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTSMGGYLTDAGEVIFDK
VEHFIQSVAVYEDQIFQKRGRIQRAYENNEAAKARREFPEEPWAPVVDKVKLGEPGYKER
YYAEKFNLSNPEEIDNIRKDTVLKYVEGLCWVCRYYYQGVCSWQWYYPYHYAPFASDIKD
LLDLEITFFLGEPFKPFDQLMGTLPAASASALPEKYRNLMTDPSSTILDFYPSDFEIDMN
GKRFAWQKLLAATRKLEGSLTKEEYLRNSLMFDLIYVSPTHGLAPHILLYYQIYGQSPPF
ERPVWPIDTNASGGMNGYLLLSERNGLNYFLFSPVSGLQHIEYNQVLNATYLNPPNHKHV
PNPPKGVVMPKKVLKSFDIKPLPMLWHEDNGGRRQGRERLQVPGAIAGPQLGEAAHRLVK
NTLNIKSSDIAHGPLQQPFRNFLSNHTINRHRPAGPSGYESNFGEDTSYYHGHHNYHQGV
MSRPRFPISSNGGQVERQNFRIHDRSHYHEQYHNVRTGFSALTMEESVRSRSAIAGSPKL
PAMMSQRMPNSGHQANINQQTMQNLGPPTPPPKWINQAPAANGGLYIRHQEPALGGGAYD
RQGKVYQVKTQLPQDMPEF
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgcctgctttttaccggtggctcgccgaccggtacccgcagtctatcgctgat
gtggtggaagaagaggctgcagcaggagaaaactgtgttttattgccagttgatgtctct
aagcccaatcccaatggcatggaattcgacaatttgtacttggatatgaatggtatcatt
cacccttgttttcatccggaaggcaagcctgcacctgctaattacgatgatgtatttaaa
tcaatattcgattatattgatcacctgtttttgttggttcgcccaaggaagcttctctat
ctggcaattgatggagttgctccaagagctaaaatgaaccagcaacgttctcggcgtttc
agagctgcaaaagatgcagctgatgcagaagctgaggaggagagattgagggaagaattt
gaggctgagggaaaatatttgactcctaaagaaaggcccgaaacatctgactcaaatgtc
atcactcctggcacccaatttatggtggtgctgtcagtggcacttcagtattatatacaa
actaggttgaaccacaaccctggatggcagaatacaaaggttattctttctgattcaaat
gtacctggtgagggagaacataaaataatgcagtacatccgatcacagcgcaaccttccc
ggttttaacccgaacactcgacattgtctttatggtttggatgcggatctgattatgctc
tccttagctacacatgaggttcacttctcgatattgagggaggtgattactctgcctggt
caacaagacaagtgttttgtgtgtggacaaaagaaatatcagttcctcaacatctgggtg
ctgcgtgaatatttgcaatatgacttagaaattcccaatcctccgtacgagattgacttt
gaacgcatagtggatgattttgtattcttatgtttctttgttggcaatgactttcttcca
catatgccaacattagagatcagggagggtgctataaatttattaatgcatgtttataga
agggaattcacttccatgggcggttatcttactgatgcgggtgaggttatattcgataaa
gtggaacacttcatccagtctgtagctgtttatgaagatcaaatatttcagaaacggggt
cgaattcagcgggcttacgaaaataatgaagcagctaaggcaagaagagagtttcccgaa
gagccatgggccccagtcgtggataaggttaagttgggggaacctggatacaaggaacgg
tattatgctgagaagtttaatttatcaaatccagaggaaattgacaatattaggaaagat
acagttttaaaatatgtagaaggcctatgttgggtctgccgctattactatcaaggtgtt
tgctcatggcaatggtactacccataccattatgctccttttgcttctgatattaaagat
ctattggatttggaaataactttcttcttgggagaaccattcaaaccatttgatcagctc
atggggaccctacctgctgcaagtgcaagtgctttgcctgaaaaatatagaaatttgatg
acggatccatcgtcgactatccttgacttctatccttctgattttgagattgatatgaat
ggtaagcgctttgcatggcagaaactgcttgctgcgacaaggaagcttgaaggttcatta
acgaaggaggagtatcttcggaatagccttatgtttgatttgatttatgtcagtcccaca
catggtttggctccacatattctcttgtactaccaaatttatggtcaatcacccccattt
gaaagacctgtttggccaattgacacaaatgctagtggcggaatgaatggataccttttg
ttatctgaaaggaatgggttgaattattttctcttttccccagtcagtgggttgcaacat
attgagtacaaccaagtcttaaatgctacatatcttaatcctcctaatcacaaacatgtc
ccaaatcctcccaagggtgtcgtcatgccgaaaaaggttttgaaatcgtttgatattaaa
ccacttcccatgttatggcatgaagacaatggtggtcggcgtcaaggaagagaaaggcta
caagtacctggagccattgctggccctcaattgggagaagcagcacatcgtcttgtgaaa
aatactcttaatatcaaatctagtgatatagcccatgggccattgcagcaaccatttcgg
aatttcctaagtaatcatacaatcaacagacacaggccggctggaccctctgggtatgaa
agcaattttggggaggacacgagctattatcatggacatcacaattatcaccagggagta
atgtctaggcctaggtttcctatctcatctaatggtgggcaagtagagagacaaaatttt
aggatacatgataggtcacattatcatgagcagtaccacaatgtcaggactgggttctct
gctttgacaatggaagaaagtgtaagatctaggtcagctatagcaggatcaccaaagcta
cctgcaatgatgtcccaaaggatgccaaattcaggacaccaagcaaacataaaccaacaa
actatgcagaacttgggacctccaacaccacctccaaagtggattaatcaagctccggct
gcaaatggaggattgtatattaggcatcaggaacctgcattggggggaggcgcgtatgac
aggcaggggaaggtttaccaggttaaaacacaactcccacaggatatgccagagttttga
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