Quillaja saponaria (soapbark tree): O6P43_010488
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Entry
O6P43_010488 CDS
T09778
Name
(GenBank) ABC transporter family protein
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O6P43_010488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsa03019
]
O6P43_010488
Messenger RNA biogenesis [BR:
qsa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
O6P43_010488
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
ORC-CDC6-like
AAA_15
NACHT
nSTAND3
AAA_23
SMC_N
AAA
AAA_5
AAA_28
AAA_24
AAA_25
SRP54
AAA_30
AAA_22
Zeta_toxin
G-alpha
AAA_14
PduV-EutP
AAA_7
AAA_33
Motif
Other DBs
NCBI-ProteinID:
KAJ7972630
UniProt:
A0AAD7Q0K4
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All DBs
Position
4
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AA seq
292 aa
AA seq
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MVEENGNDDLKGIRVQGMQFSYDGQPPLFVNFNLNISPGSRCLLVGANGSGKTTLLKIMA
GKHMVGGRDVVRVLNCSAFHDTQLVCGGNLAYLGGSWSKTVGSAGEIPLQGDFSAEHMIF
GVEGVDPVRREKLIELLDIDLQWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEVTVDLDV
VARMDLLDFFREECEQRGATLVYATHIFDGLETWATHLAYIQDGELRRAEKLSDVSELKN
STNLLSVVESWLRAETKRERTNPSNPVNQIQKTNNPFASSPFVSSRHMAYYR
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggtagaagaaaatggaaatgacgatttgaaaggtattagggtacagggcatgcaattc
tcatacgatggacaacctccactcttcgtcaatttcaaccttaatatctcgcctggatct
cgatgccttctcgttggtgccaacggatcaggtaagaccactttgttgaagattatggct
ggtaagcatatggttggaggaagagacgttgtgcgggtcttaaattgttctgcgtttcat
gacactcaactggtttgtggtggcaatttagcctatttgggaggatcttggagtaaaact
gttggctctgctggagaaattccactccagggagacttttctgcagaacatatgattttt
ggagttgaaggcgttgatcctgttaggagagagaagttgatcgagctgcttgatatagat
ttgcagtggcgcatgcacaaagtatctgatgggcagcggcgtcgagtccaaatctgcatg
ggtcttcttcatcctttcaaggttcttttgctagatgaggttacagttgacctggatgtt
gttgctaggatggatttacttgacttcttcagagaagaatgtgaacagagaggagctaca
cttgtatatgcaacccatatttttgatgggcttgagacatgggcaactcatctagcatat
attcaagatggtgagctgaggagagctgagaagttatcagatgttagtgaattgaagaat
tcgaccaatctgctttctgtggttgagtcctggctgcgtgctgaaacaaagcgtgaaagg
acaaaccccagtaaccctgtcaatcaaattcaaaagacgaataatccttttgctagttct
ccttttgtgtcatctaggcacatggcatattaccgctga
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