Quillaja saponaria (soapbark tree): O6P43_027535
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Entry
O6P43_027535 CDS
T09778
Name
(GenBank) RING-box protein 1a
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03420
Nucleotide excision repair
qsa04120
Ubiquitin mediated proteolysis
qsa04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
O6P43_027535
04120 Ubiquitin mediated proteolysis
O6P43_027535
09124 Replication and repair
03420 Nucleotide excision repair
O6P43_027535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
qsa04121
]
O6P43_027535
03400 DNA repair and recombination proteins [BR:
qsa03400
]
O6P43_027535
Enzymes [BR:
qsa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
O6P43_027535
Ubiquitin system [BR:
qsa04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
O6P43_027535
Multi subunit type E3
SCF complex
Ring finger protein
O6P43_027535
Cul2 complex
O6P43_027535
Cul3 complex
O6P43_027535
Cul4 complex
O6P43_027535
Cul7 complex
O6P43_027535
Cul8 complex
O6P43_027535
Cul9 complex
O6P43_027535
DNA repair and recombination proteins [BR:
qsa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
O6P43_027535
TCR (transcription coupled repair) factors
Cul4-CSA complex
O6P43_027535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
zf-RING_16
Motif
Other DBs
NCBI-ProteinID:
KAJ7951497
UniProt:
A0AAD7L560
LinkDB
All DBs
Position
11
Genome browser
AA seq
127 aa
AA seq
DB search
MATPMDTDVIVVPVGEGSSSHPGPSSSSSLASSSTRKPKRFEIKKWNAVSLWAWDIVVDN
CAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEW
EFQKYGH
NT seq
384 nt
NT seq
+upstream
nt +downstream
nt
atggctacgcctatggacaccgacgttatagtggttcccgttggagagggttcgtcgagt
caccctggaccctcttcttcctcttcccttgcttcttcttcgaccaggaaaccaaagcga
ttcgaaatcaagaagtggaacgccgtgtctctctgggcatgggatatcgttgtggataac
tgtgcaatctgtaggaaccatatcatggatctatgcattgaatgtcaagctaatcaagct
agtgctactagcgaagaatgcaccgttgcttggggggtgtgcaaccatgcattccatttc
cattgcatcagccgatggctcaaaacacgtcaagtgtgcccactcgacaacagtgagtgg
gagtttcagaaatatggccactga
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