Qipengyuania spongiae: L1F33_08625
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Entry
L1F33_08625 CDS
T08950
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
qsp
Qipengyuania spongiae
Pathway
qsp01501
beta-Lactam resistance
qsp01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
qsp00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
L1F33_08625
01503 Cationic antimicrobial peptide (CAMP) resistance
L1F33_08625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
qsp03036
]
L1F33_08625
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
qsp02000
]
L1F33_08625
01504 Antimicrobial resistance genes [BR:
qsp01504
]
L1F33_08625
Chromosome and associated proteins [BR:
qsp03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
L1F33_08625
Transporters [BR:
qsp02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
L1F33_08625
Antimicrobial resistance genes [BR:
qsp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
L1F33_08625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
HH_MFP_RND
RND-MFP_C
YknX_C
Beta-barrel_RND_2
BSH_CzcB
BSH_CusB
HH_EMRA
CzcB_C
HH_CzcB
Biotin_lipoyl
BSH_YknX
HH_YBHG
Motif
Other DBs
NCBI-ProteinID:
UVI38327
UniProt:
A0ABY5SUV3
LinkDB
All DBs
Position
1722761..1723951
Genome browser
AA seq
396 aa
AA seq
DB search
MMRHLAGLAASLLLLACSGPEAPPEPQAVPVRTITVARQAVPNVIELPGRVEAVRSAEVR
ARVTGIVQERLFEEGTDVREGQPLFRIDPRELRASYAQTQAALERARATASNARAVVERY
RPLVDENAISGQEYDAALAASREAEANVAQIRAQLEASSLQLGYTTVRAPIAGRVGRGLI
TEGALVSQAEGTLMTRIEQISPVYVSFSQAASEVLRLRRAITAGEVDLDENDRVEVRLTF
SDGTEYPIPGYIDFLAFSVDQQTGTVELRAEFPNPQQLLIPGEFVRARIYAGEIQNGLSV
PQRAVNLTEQGGSVFVVDRNGQAAMRQIELGAMVGGNWIVESGLNPGDRVIVSNVQKIRP
GAPVQIVTTPTGRRPAGQSTPNRSTANQPAAQRQDR
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgccacctcgccggcctcgctgccagccttctccttctcgcatgttccggtccg
gaagcgccgcccgagccgcaggccgttccggtgcgcacgatcaccgttgcgcggcaggcc
gtgccgaacgtcatcgaactgccggggcgtgtggaggcggtgcgatccgcggaggtacgg
gcgcgggtgaccggcatcgtgcaggaacggctcttcgaggagggcaccgatgtccgcgag
ggtcagcccctcttccgcatcgatccacgcgaattgcgtgcgagctacgcccagacccag
gccgctctcgagagggcgcgggcgaccgcatccaatgcgcgcgcagtcgtggagcgctac
cgtccgctggtggacgaaaacgcgatcagcggtcaggaatacgacgcggcgctggctgcc
tcgcgcgaggcagaggccaatgtcgcgcagattcgcgcgcagctcgaagcgtcgtcgctg
cagctcggctacaccaccgtccgtgctccgatcgccggtcgcgtgggacgagggctgatt
accgaaggcgcactagtcagtcaggccgagggcacgctgatgacccggatcgagcagatt
tcgccggtctatgtcagcttctcgcaggctgcgagcgaggtcctgaggcttcgccgtgcg
atcacggcgggcgaagtcgatctcgacgagaacgaccgggtcgaggtccgcctgactttc
agcgacggcaccgagtatcccattcccggctatatcgactttctcgccttttccgtcgat
cagcagaccggaacggtcgagctgcgcgccgagtttcccaatccgcagcagcttctgatt
ccgggcgagttcgtccgcgcccgcatctacgccggtgaaatccagaacggattgagcgtt
ccgcagcgcgcggtgaaccttaccgaacagggcggctccgtcttcgtggtggaccggaac
gggcaagccgccatgcgccagatcgaactcggcgccatggtcggcggaaactggatcgtc
gagagcgggctcaatcccggcgatcgggtgatcgtcagcaatgtgcagaagatccgcccc
ggcgcgccggtgcagatcgtgaccacgccgaccggacgccgtccggctgggcaatccact
cccaaccgatcgacagccaaccaacccgcagcccagcgccaggatcgctga
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